RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ZMAT1Q5H9K5 638 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 FIGNQ5HY92 759 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 EP400NLQ6ZTU2 488 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 C16orf59Q7L2K0 433 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 OSTM1Q86WC4 334 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 PTRH1Q86Y79 214 aaKnown RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 CKAP2LQ8IYA6 745 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 FUKQ8N0W3 1084 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 IPO9Q96P70 1041 aaKnown RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZNF341Q9BYN7 854 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 PCED1AQ9H1Q7 454 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 PFDN2Q9UHV9 154 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 CBLCQ9ULV8 474 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 RGS12O14924 1447 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 ARVCFO00192 962 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 SRGAP2CP0DJJ0 459 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 NAT1P18440 290 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 KRT15P19012 456 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 PTGS1P23219 599 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 JAM2P57087 298 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 ST5P78524 1137 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 IL13RA1P78552 427 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 SSRP1Q08945 709 aaKnown RBP4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 NOLC1Q14978 699 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 CRY1Q16526 586 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 FAM209AQ5JX71 171 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 MEX3CQ5U5Q3 659 aaKnown RBP4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 AGBL4Q5VU57 503 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 FOXB2Q5VYV0 432 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZBTB38Q8NAP3 1195 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 EDAQ92838 391 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 SCYL1Q96KG9 808 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZDHHC5Q9C0B5 715 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 INCENPQ9NQS7 918 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 GALNT8Q9NY28 637 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 OAZ3Q9UMX2 235 aa4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 MAGI1Q96QZ7 1491 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P18-201ENST00000438801 NCOA1Q15788 1441 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 UTRNP46939 3433 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 PRAMEF25A6NGN4 478 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 GSTA4O15217 222 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 CDC14BO60729 498 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 CLASP2O75122 1294 aaKnown RBP4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 RAD17O75943 681 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 C4BPAP04003 597 aaKnown RBP4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 HMGCRP04035 888 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 AOAHP28039 575 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 ADCY8P40145 1251 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 HERVK_113P62684 666 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 GABREP78334 506 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 KLF10Q13118 480 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 FOXE3Q13461 319 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 NRN1LQ496H8 165 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 FAM47CQ5HY64 1035 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 RNF207Q6ZRF8 634 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 CXXC5Q7LFL8 322 aaKnown RBP4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 WNK4Q96J92 1243 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 DPYSL5Q9BPU6 564 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 CCDC113Q9H0I3 377 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 BTBD7Q9P203 1132 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 FBXO10Q9UK96 956 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 NR2E1Q9Y466 385 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 FER1L4A9Z1Z3 1794 aa4.55□□□□□ -1.68
HMGB1P18-201ENST00000438801 TARBP1Q13395 1621 aaKnown RBP4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 EP400Q96L91 3159 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 CCDC66A2RUB6 948 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 CCDC85CA6NKD9 419 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 NPIPB8E9PQR5 432 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 ZNF561-AS1K7EIQ3 104 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 MATN2O00339 956 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 KCNK3O14649 394 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 CRTAMO95727 393 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 ACO1P21399 889 aaKnown RBP4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 MC4RP32245 332 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 RBM25P49756 843 aaKnown RBP4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 DNM2P50570 870 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 KCNQ1P51787 676 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 NFYCQ13952 458 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 TBR1Q16650 682 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 MIIPQ5JXC2 388 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 Q6ZSN1 163 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 POLNQ7Z5Q5 900 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 EXOC2Q96KP1 924 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 MENTQ9BUN1 341 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 BTBD2Q9BX70 525 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 C12orf65Q9H3J6 166 aaKnown RBP4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 SMURF1Q9HCE7 757 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 PPP1R1BQ9UD71 204 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 PCDHA9Q9Y5H5 950 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 SLC30A1Q9Y6M5 507 aa4.54□□□□□ -1.68
HMGB1P18-201ENST00000438801 TTC37Q6PGP7 1564 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 CACNA1GO43497 2377 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 ARHGAP6O43182 974 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 DIAPH1O60610 1272 aaKnown RBP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 MPIG6BO95866 241 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 FAM153BP0C7A2 387 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 LACTBP83111 547 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 DUSP8Q13202 625 aa4.53□□□□□ -1.68
HMGB1P18-201ENST00000438801 EIF4HQ15056 248 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 420.6 ms