RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CTSHP09668 335 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 CKBP12277 381 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 CDC25AP30304 524 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 THPOP40225 353 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 CCT6AP40227 531 aaKnown RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 RBL2Q08999 1139 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 PDIA5Q14554 519 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 TARBP2Q15633 366 aaKnown RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 CATSPER3Q86XQ3 398 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 POLR3CQ9BUI4 534 aaPredicted RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
SNRPB-202ENST00000438552 TUFT1Q9NNX1 390 aa18.08■□□□□ 0.48
SNRPB-202ENST00000438552 A0A087WWV3 80 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 RPA1P27694 616 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 NPEPPSP55786 919 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 PRPF38BQ5VTL8 546 aaKnown RBP18.07■□□□□ 0.48
SNRPB-202ENST00000438552 MFSD5Q6N075 450 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 TAF2Q6P1X5 1199 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 LRRC8DQ7L1W4 858 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 ZNF579Q8NAF0 562 aaKnown RBP18.07■□□□□ 0.48
SNRPB-202ENST00000438552 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 CEP89Q96ST8 783 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 MMTAG2Q9BU76 263 aaKnown RBP18.07■□□□□ 0.48
SNRPB-202ENST00000438552 FBXO2Q9UK22 296 aaPredicted RBP18.07■□□□□ 0.48
SNRPB-202ENST00000438552 PCDHA2Q9Y5H9 948 aa18.07■□□□□ 0.48
SNRPB-202ENST00000438552 LYPLA2O95372 231 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 CSF2RAP15509 400 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 SELPP16109 830 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 CLCN3P51790 818 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
SNRPB-202ENST00000438552 FPGSQ05932 587 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 TBC1D8BQ0IIM8 1120 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 STK38Q15208 465 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 ECM1Q16610 540 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 TRAF7Q6Q0C0 670 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 LRRC71Q8N4P6 559 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 RETREG2Q8NC44 543 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 CYP26B1Q9NR63 512 aa18.06■□□□□ 0.48
SNRPB-202ENST00000438552 BMP2KQ9NSY1 1161 aaPredicted RBP18.06■□□□□ 0.48
SNRPB-202ENST00000438552 SMIM35A0A1B0GVV1 85 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 IQCF3P0C7M6 154 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 XKR9Q5GH70 373 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 TMEM199Q8N511 208 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 METTL13Q8N6R0 699 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
SNRPB-202ENST00000438552 CLIC6Q96NY7 704 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 GDF15Q99988 308 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 CSRNP2Q9H175 543 aa18.05■□□□□ 0.48
SNRPB-202ENST00000438552 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
SNRPB-202ENST00000438552 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 CAND2O75155 1236 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 YEATS4O95619 227 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 LONP1P36776 959 aaKnown RBP18.04■□□□□ 0.48
SNRPB-202ENST00000438552 EPHB4P54760 987 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 TMEM62Q0P6H9 643 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 MBTPS1Q14703 1052 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
SNRPB-202ENST00000438552 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 OTUD6AQ7L8S5 288 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 RSPH3Q86UC2 560 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 LINC01465Q8N7H1 131 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 AK8Q96MA6 479 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 DDX19AQ9NUU7 478 aaKnown RBP18.04■□□□□ 0.48
SNRPB-202ENST00000438552 KIAA1024Q9UPX6 916 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
SNRPB-202ENST00000438552 STK24Q9Y6E0 443 aa18.04■□□□□ 0.48
SNRPB-202ENST00000438552 MORC2Q9Y6X9 1032 aaPredicted RBP18.04■□□□□ 0.48
SNRPB-202ENST00000438552 KDM3AQ9Y4C1 1321 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 SPTLC2O15270 562 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 MAGEB2O15479 319 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 VTNP04004 478 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 ACRP10323 421 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 NCLP19338 710 aaKnown RBP18.03■□□□□ 0.48
SNRPB-202ENST00000438552 RARRES1P49788 294 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
SNRPB-202ENST00000438552 NUCB2P80303 420 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 MRPS6P82932 125 aaKnown RBP18.03■□□□□ 0.48
SNRPB-202ENST00000438552 MGAT3Q09327 533 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.484e-8■□□□□ 8.6
SNRPB-202ENST00000438552 DRP2Q13474 957 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 SPECC1Q5M775 1068 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 DEFB128Q7Z7B8 93 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 RPAINQ86UA6 219 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 CABP7Q86V35 215 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 KIAA0319LQ8IZA0 1049 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 KRI1Q8N9T8 703 aaKnown RBP18.03■□□□□ 0.48
SNRPB-202ENST00000438552 PPP1R16BQ96T49 567 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 PLIN2Q99541 437 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 UBE2OQ9C0C9 1292 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms