RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 SHROOM3Q8TF72 1996 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 TK2O00142 265 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 AXIN1O15169 862 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 NTRK1P04629 796 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 GNAT1P11488 350 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 PDE6AP16499 860 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 PDE4AP27815 886 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
RTN4-211ENST00000438462 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 CCDC8Q9H0W5 538 aaPredicted RBP13.15□□□□□ -0.3
RTN4-211ENST00000438462 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
RTN4-211ENST00000438462 PCDHB7Q9Y5E2 793 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 SPTA1P02549 2419 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 CFAP46Q8IYW2 2715 aa13.15□□□□□ -0.3
RTN4-211ENST00000438462 CLUHO75153 1309 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 TTLL1O95922 423 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 CEACAM1P13688 526 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 PPM1AP35813 382 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
RTN4-211ENST00000438462 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
RTN4-211ENST00000438462 ADCY1Q08828 1119 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 SLC44A4Q53GD3 710 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 LMBR1Q8WVP7 490 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 STAMQ92783 540 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 TLR7Q9NYK1 1049 aaKnown RBP13.14□□□□□ -0.31
RTN4-211ENST00000438462 CDY2AQ9Y6F7 541 aa13.14□□□□□ -0.31
RTN4-211ENST00000438462 ANHXE9PGG2 379 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 NCAM2O15394 837 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 PLA2G6O60733 806 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 LGALS2P05162 132 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 MCCP23508 829 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 ADAM17P78536 824 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.313e-16■□□□□ 9.4
RTN4-211ENST00000438462 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
RTN4-211ENST00000438462 CEP68Q76N32 757 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
RTN4-211ENST00000438462 WDR6Q9NNW5 1121 aaKnown RBP13.13□□□□□ -0.31
RTN4-211ENST00000438462 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 MTMR4Q9NYA4 1195 aa13.13□□□□□ -0.31
RTN4-211ENST00000438462 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
RTN4-211ENST00000438462 CHURC1-FNTBB4DL54 471 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 CXCL14O95715 111 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 FNTBP49356 437 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 SCAPQ12770 1279 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 FZD5Q13467 585 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 TCEAL3Q969E4 200 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
RTN4-211ENST00000438462 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
RTN4-211ENST00000438462 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 C4orf47A7E2U8 309 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 PYCARD-AS1I3L0S3 204 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 EPN2O95208 641 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 MBD4O95243 580 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 FGFR1P11362 822 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 CNR2P34972 360 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 WTAPQ15007 396 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
RTN4-211ENST00000438462 MEIS3Q99687 375 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
RTN4-211ENST00000438462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
RTN4-211ENST00000438462 ATXN7O15265 892 aaPredicted RBP13.1□□□□□ -0.31
RTN4-211ENST00000438462 GGPS1O95749 300 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 LAMP2P13473 410 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 CSRP1P21291 193 aaKnown RBP13.1□□□□□ -0.31
RTN4-211ENST00000438462 CCR3P51677 355 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 PAK2Q13177 524 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 MTX1Q13505 466 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 STXBP2Q15833 593 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 TAF2Q6P1X5 1199 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms