RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 DDX42Q86XP3 938 aaKnown RBP eCLIP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 FMNL3Q8IVF7 1028 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 CCDC13Q8IYE1 715 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 SLFN12Q8IYM2 578 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 CACNA2D3Q8IZS8 1091 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 OR2W6PQ8NHA6 318 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 ERMNQ8TAM6 284 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 RBM46Q8TBY0 533 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 U2AF1L4Q8WU68 220 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 TBC1D22AQ8WUA7 517 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 TATDN2Q93075 761 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 ZKSCAN4Q969J2 545 aaPredicted RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 VTI1AQ96AJ9 217 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 HES6Q96HZ4 224 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 NAP1L3Q99457 506 aaPredicted RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 PSMD1Q99460 953 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 AP1M1Q9BXS5 423 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 TXLNGYQ9BZA5 131 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 DDX47Q9H0S4 455 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 KDM4CQ9H3R0 1056 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 CENPHQ9H3R5 247 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 KCNMB3Q9NPA1 279 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 SIX2Q9NPC8 291 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 TYW1Q9NV66 732 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 ANKIB1Q9P2G1 1089 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 CNOT8Q9UFF9 292 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 UTP11Q9Y3A2 253 aaKnown RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 NCANO14594 1321 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 MYO3BQ8WXR4 1341 aa4.68□□□□□ -1.66
HLA-N-201ENST00000437516 COL16A1Q07092 1604 aaPredicted RBP4.68□□□□□ -1.66
HLA-N-201ENST00000437516 POTEB3A0JP26 581 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCT8L1PA6NM43 557 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 POTECB2RU33 542 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 DNM1LO00429 736 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 EIF3DO15371 548 aaKnown RBP eCLIP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 ASAP2O43150 1006 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TTI1O43156 1089 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 KCNQ2O43526 872 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PPP1R11O60927 126 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 EYA4O95677 639 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GGPS1O95749 300 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TTLL1O95922 423 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GSTA1P08263 222 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 NUDT17P0C025 328 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCDC172P0C7W6 258 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 ALAS1P13196 640 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 AKR1B1P15121 316 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 HSPA6P17066 643 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GAP43P17677 238 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TNFAIP3P21580 790 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 RPA1P27694 616 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TMOD1P28289 359 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GBP1P32455 592 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 SOX5P35711 763 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PMS2P54278 862 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GALCP54803 685 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 HADHBP55084 474 aaKnown RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PTENP60484 403 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 MAGOHP61326 146 aaKnown RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GPSM2P81274 684 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CACNB1Q02641 598 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 DHX9Q08211 1270 aaKnown RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 AP3B2Q13367 1082 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 XRCC4Q13426 336 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 NEDD9Q14511 834 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 ITIH4Q14624 930 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PLS1Q14651 629 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 SNCBQ16143 134 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 QPCTQ16769 361 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 Q4G0T1 1027 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 ANKRD20A8PQ5CZ79 823 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 ERMARDQ5T6L9 678 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GKAP1Q5VSY0 366 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TCERG1LQ5VWI1 586 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 DUPD1Q68J44 220 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 TTBK2Q6IQ55 1244 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 POTEBQ6S5H4 581 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 BTNL9Q6UXG8 535 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 DPP8Q6V1X1 898 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CPLX4Q7Z7G2 160 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 DAAM2Q86T65 1068 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 SFR1Q86XK3 245 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 COL23A1Q86Y22 540 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PARP9Q8IXQ6 854 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 FUKQ8N0W3 1084 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 LRRC47Q8N1G4 583 aaKnown RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCDC24Q8N4L8 307 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GPATCH11Q8N954 259 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 PROCA1Q8NCQ7 364 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCDC197Q8NCU1 140 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 GIMAP7Q8NHV1 300 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 SLC30A5Q8TAD4 765 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 LNX1Q8TBB1 728 aaPredicted RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 RFFLQ8WZ73 363 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCT6BQ92526 530 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 MAGOHBQ96A72 148 aaKnown RBP4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CHMP6Q96FZ7 201 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 SGSM3Q96HU1 749 aa4.67□□□□□ -1.66
HLA-N-201ENST00000437516 CCDC17Q96LX7 622 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms