RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 LINC01465Q8N7H1 131 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 RNPC3Q96LT9 517 aaKnown RBP20.62■□□□□ 0.89
HLA-F-220ENST00000434407 RGL1Q9NZL6 768 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 LAD1O00515 517 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 MAGEB2O15479 319 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 SLITRK3O94933 977 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 LYPLA2O95372 231 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 FXR1P51114 621 aaKnown RBP eCLIP20.61■□□□□ 0.89
HLA-F-220ENST00000434407 PTGDRQ13258 359 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 ANO5Q75V66 913 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 NEK9Q8TD19 979 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 DYDC2Q96IM9 177 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 EIF2AK1Q9BQI3 630 aaKnown RBP20.61■□□□□ 0.89
HLA-F-220ENST00000434407 LXNQ9BS40 222 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
HLA-F-220ENST00000434407 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 POTEMA6NI47 508 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 CTSHP09668 335 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 PRPHP41219 470 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 FXR2P51116 673 aaKnown RBP eCLIP20.6■□□□□ 0.89
HLA-F-220ENST00000434407 TRMT1LQ7Z2T5 733 aaKnown RBP20.6■□□□□ 0.89
HLA-F-220ENST00000434407 OSBPL7Q9BZF2 842 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 ZSWIM4Q9H7M6 989 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 CXXC1Q9P0U4 656 aaPredicted RBP20.6■□□□□ 0.89
HLA-F-220ENST00000434407 MTMR6Q9Y217 621 aa20.6■□□□□ 0.89
HLA-F-220ENST00000434407 KDM3AQ9Y4C1 1321 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 IGKV6-21A0A0C4DH24 114 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
HLA-F-220ENST00000434407 SOX1O00570 391 aaPredicted RBP20.59■□□□□ 0.89
HLA-F-220ENST00000434407 TECP42680 631 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 MRPS6P82932 125 aaKnown RBP20.59■□□□□ 0.89
HLA-F-220ENST00000434407 PDIA5Q14554 519 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 PLEKHG4Q58EX7 1191 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 OTOP2Q7RTS6 562 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 FAM49AQ9H0Q0 323 aaPredicted RBP20.59■□□□□ 0.89
HLA-F-220ENST00000434407 PPME1Q9Y570 386 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 PTPRSQ13332 1948 aa20.59■□□□□ 0.89
HLA-F-220ENST00000434407 MYO9BQ13459 2157 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 TMEM150BA6NC51 233 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 DDX11L8A8MPP1 907 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 STX6O43752 255 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 SPATA31C1P0DKV0 1188 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 ACTN1P12814 892 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 ATP2C1P98194 919 aaPredicted RBP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 CYP4A11Q02928 519 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 RESTQ13127 1097 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 CTTNQ14247 550 aaKnown RBP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 TCTN1Q2MV58 587 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 IER5Q5VY09 327 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 CNKSR3Q6P9H4 555 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 IGSF22Q8N9C0 903 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 POLR3CQ9BUI4 534 aaPredicted RBP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 FTOQ9C0B1 505 aaKnown RBP eCLIP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 MTIF3Q9H2K0 278 aaKnown RBP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 SEPT9Q9UHD8 586 aaPredicted RBP20.58■□□□□ 0.89
HLA-F-220ENST00000434407 CDY2AQ9Y6F7 541 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 SQORQ9Y6N5 450 aa20.58■□□□□ 0.89
HLA-F-220ENST00000434407 BAIAP3O94812 1187 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 TBC1D8BQ0IIM8 1120 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 MKRN4PQ13434 485 aaPredicted RBP20.57■□□□□ 0.88
HLA-F-220ENST00000434407 IL17AQ16552 155 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 TMEM266Q2M3C6 531 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 EFCAB12Q6NXP0 572 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 TPH2Q8IWU9 490 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 TUFT1Q9NNX1 390 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 CYP26B1Q9NR63 512 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 TRPV2Q9Y5S1 764 aa20.57■□□□□ 0.88
HLA-F-220ENST00000434407 GBF1Q92538 1859 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 MAFO75444 373 aaPredicted RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 YWHABP31946 246 aaKnown RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 SMAD3P84022 425 aaKnown RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 MTERF2Q49AM1 385 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 FBXO47Q5MNV8 452 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 ARL6IP4Q66PJ3 421 aaKnown RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 PLA2G4FQ68DD2 849 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 DBF4BQ8NFT6 615 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 CELF4Q9BZC1 486 aaKnown RBP20.56■□□□□ 0.88
HLA-F-220ENST00000434407 MYH15Q9Y2K3 1946 aa20.56■□□□□ 0.88
HLA-F-220ENST00000434407 ABHD14A-ACY1A0A1B0GW23 586 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 ZBTB39O15060 712 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 MED24O75448 989 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.88
HLA-F-220ENST00000434407 MUTP22033 750 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 RPA1P27694 616 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 TMOD1P28289 359 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 CLCN3P51790 818 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 NPEPPSP55786 919 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 LPIN1Q14693 890 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 OTUD6AQ7L8S5 288 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 CATSPER3Q86XQ3 398 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 ZNF710Q8N1W2 664 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 METTL13Q8N6R0 699 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 ZNF579Q8NAF0 562 aaKnown RBP20.55■□□□□ 0.88
HLA-F-220ENST00000434407 SH2D3AQ9BRG2 576 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 DHX33Q9H6R0 707 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms