RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 USP17L12C9JPN9 530 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 USP17L21D6R901 530 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NKRFO15226 690 aaKnown RBP eCLIP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ASAP2O43150 1006 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TTI1O43156 1089 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 GSTA2P09210 222 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SARSP49591 514 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NR1I3Q14994 352 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 DPCR1Q3MIW9 517 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SPATA24Q86W54 205 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF557Q8N988 423 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PIP4K2CQ8TBX8 421 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 THOC1Q96FV9 657 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ACCSQ96QU6 501 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 MMRN2Q9H8L6 949 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TOPORSQ9NS56 1045 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 MTMR4Q9NYA4 1195 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 THEGQ9P2T0 379 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 BRWD1Q9NSI6 2320 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 GREB1LQ9C091 1923 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 STRCP1A6NGW2 1772 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 EIF3HO15372 352 aaKnown RBP eCLIP4.07□□□□□ -1.767e-7■■■□□ 17.6
SHPRH-205ENST00000433355 CDH16O75309 829 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PSAPP07602 524 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CYP2C8P10632 490 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TFAP4Q01664 338 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SEC23AQ15436 765 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 UTP6Q9NYH9 597 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NRBP1Q9UHY1 535 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ADGRG1Q9Y653 693 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CLUHO75153 1309 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 LMNAP02545 664 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 HADHBP55084 474 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PDE4DQ08499 809 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TRPC3Q13507 836 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PHC3Q8NDX5 983 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ZKSCAN3Q9BRR0 538 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CYLDQ9NQC7 956 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 I3L4J1 428 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 AIF1P55008 147 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RAD54LQ92698 747 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 MBOAT7Q96N66 472 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ARFGEF1Q9Y6D6 1849 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RSPH10B2B2RC85 870 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CCNT1O60563 726 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RNF40O75150 1001 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 KRT37O76014 449 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 KRT38O76015 456 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SLC25A27O95847 323 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RSPH10BP0C881 870 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 BMP3P12645 472 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 EIF6P56537 245 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NOP14P78316 857 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ENOX2Q16206 610 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 HERC4Q5GLZ8 1057 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CYFIP1Q7L576 1253 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PSTKQ8IV42 348 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 DNERQ8NFT8 737 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SLF1Q9BQI6 1058 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 STK33Q9BYT3 514 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 AFF2P51816 1311 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 USP17L3A6NCW0 530 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 USP17L4A6NCW7 530 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 KRT16P08779 473 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 H2AFXP16104 143 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SNX1Q13596 522 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 USP17L1Q7RTZ2 530 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 METTL16Q86W50 562 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 FAM9CQ8IZT9 166 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SLCO2A1Q92959 643 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 KAZALD1Q96I82 304 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 CFAP57Q96MR6 1250 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 NT5C1BQ96P26 610 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SRPK1Q96SB4 655 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.07□□□□□ -1.762e-6■■■□□ 16
SHPRH-205ENST00000433355 CNOT7Q9UIV1 285 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 MINPP1Q9UNW1 487 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SHOC2Q9UQ13 582 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 AXIN2Q9Y2T1 843 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 BTBD18B2RXH4 712 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 M0R2C6 588 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 LCA5LO95447 670 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 PSMC5P62195 406 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SPATS1Q496A3 300 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 C6orf118Q5T5N4 469 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 GPBP1Q86WP2 473 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ZDHHC17Q8IUH5 632 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TRMT44Q8IYL2 757 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 STAG2Q8N3U4 1231 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 RSRC1Q96IZ7 334 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 SMC6Q96SB8 1091 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 ZCCHC17Q9NP64 241 aaKnown RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 HOXC10Q9NYD6 342 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 FBXO2Q9UK22 296 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-205ENST00000433355 HPS5Q9UPZ3 1129 aa4.07□□□□□ -1.76
SHPRH-205ENST00000433355 TRAF3IP3Q9Y228 551 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms