RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 UPF3AQ9H1J1 476 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PRG3Q9Y2Y8 225 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PPME1Q9Y570 386 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ATP6V1DQ9Y5K8 247 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 INSRRP14616 1297 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PSMC5P62195 406 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 GOLGA8FQ08AF8 430 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 GOLGA8DPQ0D2H9 430 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 TPD52L1Q16890 204 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 USP17L6PQ6QN14 398 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 Q6ZUG5 572 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 CMTR2Q8IYT2 770 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 REPS2Q8NFH8 660 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 RTP3Q9BQQ7 232 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 MXRA8Q9BRK3 442 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZSWIM4Q9H7M6 989 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PPP4R2Q9NY27 417 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZSWIM5Q9P217 1185 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 DNM3Q9UQ16 869 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SOWAHBA6NEL2 793 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 H3BQ06 376 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 LAMTOR5O43504 91 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SLURP2P0DP57 97 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 KLRC1P26715 233 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 NUCB2P80303 420 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 NOLC1Q14978 699 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 MAPK6Q16659 721 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SLC24A5Q71RS6 500 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SH3RF1Q7Z6J0 888 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 NEK8Q86SG6 692 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 FAM126BQ8IXS8 530 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 TRMT2AQ8IZ69 625 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ATP8B4Q8TF62 1192 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 CKBP12277 381 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 MCM2P49736 904 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ACTR2P61160 394 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 TSPY1Q01534 308 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SMAD4Q13485 552 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 DHX8Q14562 1220 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 KYAT1Q16773 422 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 LHX8Q68G74 356 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZNF746Q6NUN9 644 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ENAHQ8N8S7 591 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 APPL2Q8NEU8 664 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZNF396Q96N95 335 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 JMJD4Q9H9V9 463 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZMYM6O95789 1325 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZNF197O14709 1029 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 UBA1P22314 1058 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 BMPR1AP36894 532 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ALDH1A3P47895 512 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 BIRC2Q13490 618 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PREPLQ4J6C6 727 aaPredicted RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 ZNF618Q5T7W0 954 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 BTNL9Q6UXG8 535 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 METTL16Q86W50 562 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 BLIDQ8IZY5 108 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 SMG7Q92540 1137 aaKnown RBP5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PDCL3Q9H2J4 239 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 PRDM6Q9NQX0 595 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 FLRT1Q9NZU1 646 aa5.1□□□□□ -1.59
UBE4A-202ENST00000431736 VPS37CA5D8V6 355 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 SMIM22K7EJ46 135 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 CNMDO75829 334 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 CD52P31358 61 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 RBM25P49756 843 aaKnown RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 ZFP91Q96JP5 570 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 DNAJC18Q9H819 358 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 FAM13BQ9NYF5 915 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 DDX41Q9UJV9 622 aaKnown RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 IPPQ9Y573 584 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 DLG5Q8TDM6 1919 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 CACNA1FO60840 1977 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 TRIM43BA6NCK2 446 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 GJB5O95377 273 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 LIG4P49917 911 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 SFSWAPQ12872 951 aaKnown RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 INF2Q27J81 1249 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 MTSS1LQ765P7 747 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 MAEAQ7L5Y9 396 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 GOLGA1Q92805 767 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 TRIM43Q96BQ3 446 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 ZNF512Q96ME7 567 aaPredicted RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 TRIOBPQ9H2D6 2365 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 P4HA1P13674 534 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 NEK4P51957 841 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 WDR5P61964 334 aaKnown RBP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 BFSP1Q12934 665 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 UBXN2BQ14CS0 331 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 ESYT1Q9BSJ8 1104 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 JADE2Q9NQC1 790 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 BCCIPQ9P287 314 aaKnown RBP eCLIP5.09□□□□□ -1.59
UBE4A-202ENST00000431736 PCDHA12Q9UN75 941 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 RIPK3Q9Y572 518 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 COL1A2P08123 1366 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 ADAMTS7Q9UKP4 1686 aa5.09□□□□□ -1.59
UBE4A-202ENST00000431736 A6NJR5 290 aa5.09□□□□□ -1.6
UBE4A-202ENST00000431736 ABL1P00519 1130 aa5.09□□□□□ -1.6
UBE4A-202ENST00000431736 ITIH5Q86UX2 942 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms