RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 UBIAD1Q9Y5Z9 338 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 SGSM2O43147 1006 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 UPP2O95045 317 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 IGHDP01880 384 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 CHMLP26374 656 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 MCM5P33992 734 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 CTNNB1P35222 781 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 MRPS6P82932 125 aaKnown RBP9.49□□□□□ -0.89
CDH13-203ENST00000431540 PRR20EP86478 221 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 PRR20CP86479 221 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 PRR20DP86480 221 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 PRR20BP86481 221 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 PRR20AP86496 221 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 PPFIA1Q13136 1202 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 MTMR1Q13613 665 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 BTG3Q14201 252 aaPredicted RBP9.49□□□□□ -0.89
CDH13-203ENST00000431540 LPIN1Q14693 890 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 GRIK4Q16099 956 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 MARCH8Q5T0T0 291 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 TMEM184AQ6ZMB5 413 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 NIPA1Q7RTP0 329 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 RASGRP4Q8TDF6 673 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
CDH13-203ENST00000431540 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 AZI2Q9H6S1 392 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 C1orf112Q9NSG2 853 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 CLDND1Q9NY35 253 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 RTEL1Q9NZ71 1219 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 CD207Q9UJ71 328 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 IGSF9BQ9UPX0 1349 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 C5orf42Q9H799 3197 aa9.49□□□□□ -0.89
CDH13-203ENST00000431540 SPDYE3A6NKU9 549 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 WFS1O76024 890 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 ITGB5P18084 799 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 IRS1P35568 1242 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 RCAN1P53805 252 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 HYAL1Q12794 435 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 USP17L6PQ6QN14 398 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 SGMS1Q86VZ5 419 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
CDH13-203ENST00000431540 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 SPPL3Q8TCT6 385 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 GLG1Q92896 1179 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 CELF4Q9BZC1 486 aaKnown RBP9.48□□□□□ -0.89
CDH13-203ENST00000431540 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
CDH13-203ENST00000431540 LY9Q9HBG7 655 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 LZTS1Q9Y250 596 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 PLXNA4Q9HCM2 1894 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 COL1A2P08123 1366 aa9.48□□□□□ -0.89
CDH13-203ENST00000431540 IGKV6D-21A0A0A0MT36 114 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 LOC730098B7Z3J9 87 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 H3BQ06 376 aaPredicted RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 GRM6O15303 877 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 HBP1O60381 514 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 ATP9AO75110 1047 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 SRGAP2BP0DMP2 458 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 INSRRP14616 1297 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 STAT5BP51692 787 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 FAM189BP81408 668 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 CDC42EP1Q00587 391 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 INSM1Q01101 510 aaPredicted RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 CAMK1Q14012 370 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 ZNF484Q5JVG2 852 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 UTP14CQ5TAP6 766 aaKnown RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 DNAJB3Q8WWF6 145 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 MXRA8Q9BRK3 442 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 SDF4Q9BRK5 362 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 BCAS3Q9H6U6 928 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 JPH1Q9HDC5 661 aaPredicted RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 RBM28Q9NW13 759 aaKnown RBP9.47□□□□□ -0.89
CDH13-203ENST00000431540 PCDHB12Q9Y5F1 795 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 TRPV2Q9Y5S1 764 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
CDH13-203ENST00000431540 CCDC69A6NI79 296 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 STXBP3O00186 592 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 MEIS1O00470 390 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 GPR182O15218 404 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 HOXA2O43364 376 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 WIPF1O43516 503 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 CTSHP09668 335 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 GHRP10912 638 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 SCG2P13521 617 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 HOXB8P17481 243 aaPredicted RBP9.46□□□□□ -0.9
CDH13-203ENST00000431540 SLC19A1P41440 591 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 SARSP49591 514 aaKnown RBP9.46□□□□□ -0.9
CDH13-203ENST00000431540 PLCB3Q01970 1234 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 NHLH1Q02575 133 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PTH1RQ03431 593 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 AP3B2Q13367 1082 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 CEP55Q53EZ4 464 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 SYNE3Q6ZMZ3 975 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms