RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PPP2R2AP63151 447 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 FOXL1Q12952 345 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 RASA3Q14644 834 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 KIZQ2M2Z5 673 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 CCDC144BQ3MJ40 725 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 LBX2Q6XYB7 198 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 KCTD1Q719H9 257 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 PRIMA1Q86XR5 153 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 ZNF764Q96H86 408 aaPredicted RBP3.16□□□□□ -1.9
CDC40-204ENST00000431461 ZFYVE21Q9BQ24 234 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 SNTG2Q9NY99 539 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 PLA2G3Q9NZ20 509 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 DSEQ9UL01 958 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 CDK11AQ9UQ88 783 aaPredicted RBP3.16□□□□□ -1.9
CDC40-204ENST00000431461 NR2E1Q9Y466 385 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 A0A0A6YYK5 440 aaPredicted RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 TRAV20A0A0B4J274 112 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 A0A1W2PQU0 124 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 B2RBV5 119 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 ARHGAP6O43182 974 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 DLX3O60479 287 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 NUDT3O95989 172 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 FGFR1P11362 822 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 PDE6AP16499 860 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 ETV4P43268 484 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 SSRP1Q08945 709 aaKnown RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 DBPQ10586 325 aaPredicted RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 TBR1Q16650 682 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 SLC10A6Q3KNW5 377 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 ZKSCAN2Q63HK3 967 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 MRM1Q6IN84 353 aaKnown RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 SYCE2Q6PIF2 218 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 CXXC5Q7LFL8 322 aaKnown RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 HOMER1Q86YM7 354 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 GPR150Q8NGU9 434 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 DCAF4Q8WV16 495 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 CFHR4Q92496 578 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 TMEM176AQ96HP8 235 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 AARSD1Q9BTE6 412 aaKnown RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 PHF20Q9BVI0 1012 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 BRIP1Q9BX63 1249 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 ZDHHC5Q9C0B5 715 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 SLKQ9H2G2 1235 aaPredicted RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 NELFAQ9H3P2 528 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 SLC39A2Q9NP94 309 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 CEP72Q9P209 647 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 PTGFRNQ9P2B2 879 aa3.15□□□□□ -1.91
CDC40-204ENST00000431461 PUF60Q9UHX1 559 aaKnown RBP3.15□□□□□ -1.91
CDC40-204ENST00000431461 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 PMS2P1A4D2B8 440 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 EFCAB14O75071 495 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 CDK4P11802 303 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 SUMO1P63165 101 aaKnown RBP3.14□□□□□ -1.91
CDC40-204ENST00000431461 CRHR2Q13324 411 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 BMS1Q14692 1282 aaKnown RBP3.14□□□□□ -1.91
CDC40-204ENST00000431461 EIF4HQ15056 248 aaKnown RBP3.14□□□□□ -1.91
CDC40-204ENST00000431461 C2orf27AQ580R0 203 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 Q6ZPA2 131 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 USP30Q70CQ3 517 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 USP53Q70EK8 1073 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 ADGRE4PQ86SQ3 457 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 SGMS1Q86VZ5 419 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 TMPRSS6Q8IU80 811 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 THEMISQ8N1K5 641 aaPredicted RBP3.14□□□□□ -1.91
CDC40-204ENST00000431461 CELF2-AS1Q8N7Q2 184 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 JMYQ8N9B5 988 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 KCNJ15Q99712 375 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 CDC6Q99741 560 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 IER2Q9BTL4 223 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 SPATA9Q9BWV2 254 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 KIAA1683Q9H0B3 1180 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 ST7Q9NRC1 585 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 ADARB2Q9NS39 739 aaKnown RBP3.14□□□□□ -1.91
CDC40-204ENST00000431461 FBXO10Q9UK96 956 aa3.14□□□□□ -1.91
CDC40-204ENST00000431461 TLDC2A0PJX2 215 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 CAPN14A8MX76 684 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 FAM47E-STBD1D6RA91 191 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 MASP2O00187 686 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 ENPP3O14638 875 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 HSD3B2P26439 372 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 C21orf58P58505 322 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 GPR85P60893 370 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 HHEXQ03014 270 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 GRM7Q14831 915 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 BTBD8Q5XKL5 378 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 TRIM68Q6AZZ1 485 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 LAIR1Q6GTX8 287 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 LARP4Q71RC2 724 aaKnown RBP eCLIP3.13□□□□□ -1.91
CDC40-204ENST00000431461 MAMDC2Q7Z304 686 aaPredicted RBP3.13□□□□□ -1.91
CDC40-204ENST00000431461 RPUSD2Q8IZ73 545 aaKnown RBP3.13□□□□□ -1.91
CDC40-204ENST00000431461 IFNL3Q8IZI9 196 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 NLGN4XQ8N0W4 816 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 ZBTB38Q8NAP3 1195 aaPredicted RBP3.13□□□□□ -1.91
CDC40-204ENST00000431461 APPBP2Q92624 585 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 WNK4Q96J92 1243 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 PARPBPQ9NWS1 579 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 GALNT8Q9NY28 637 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 HECAQ9UBI9 543 aaPredicted RBP3.13□□□□□ -1.91
CDC40-204ENST00000431461 PLAAQ9Y263 795 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms