RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 LPIN1Q14693 890 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 UGCGQ16739 394 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDAC6-207ENST00000430858 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-207ENST00000430858 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
HDAC6-207ENST00000430858 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 MYOCDQ8IZQ8 938 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 MYLIPQ8WY64 445 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 HAS1Q92839 578 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 CELF4Q9BZC1 486 aaKnown RBP11.05□□□□□ -0.64
HDAC6-207ENST00000430858 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 KAT6AQ92794 2004 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 DKC1O60832 514 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC6-207ENST00000430858 FOSL2P15408 326 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 TMOD1P28289 359 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 PSMC5P62195 406 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 GUCY1B3Q02153 619 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 XKR3Q5GH77 459 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 POTEDQ86YR6 584 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-207ENST00000430858 RAD9AQ99638 391 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-207ENST00000430858 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
HDAC6-207ENST00000430858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 EML1O00423 815 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 NEMFO60524 1076 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 P4HBP07237 508 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 QARSP47897 775 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 EPHA7Q15375 998 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 CALCRLQ16602 461 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 ODR4Q5SWX8 454 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 TOP1MTQ969P6 601 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 TMX3Q96JJ7 454 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 NIFKQ9BYG3 293 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 PRDM12Q9H4Q4 367 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 AGO3Q9H9G7 860 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 INSL6Q9Y581 213 aa11.03□□□□□ -0.64
HDAC6-207ENST00000430858 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
HDAC6-207ENST00000430858 STBD1O95210 358 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 CD52P31358 61 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 CRYBB1P53674 252 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-207ENST00000430858 HTRA4P83105 476 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-207ENST00000430858 TAP1Q03518 808 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 PAK2Q13177 524 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 ORC2Q13416 577 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-207ENST00000430858 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.65
HDAC6-207ENST00000430858 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 BANK1Q8NDB2 785 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-207ENST00000430858 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 PADI3Q9ULW8 664 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 PCDHA12Q9UN75 941 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
HDAC6-207ENST00000430858 LCHNA4D1U4 455 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 RBAK-RBAKDNI3L0D1 243 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 WNT7AO00755 349 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 ENPP3O14638 875 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 GPR182O15218 404 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 GPR32O75388 356 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
HDAC6-207ENST00000430858 VTNP04004 478 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 MCM7P33993 719 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 TRAPPC10P48553 1259 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 CLCN3P51790 818 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
HDAC6-207ENST00000430858 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 ANO5Q75V66 913 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 NOSTRINQ8IVI9 506 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 C4orf19Q8IY42 314 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 LRRC71Q8N4P6 559 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 MTMR9Q96QG7 549 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 CEP89Q96ST8 783 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 YME1L1Q96TA2 773 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 JPH2Q9BR39 696 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-207ENST00000430858 BACH2Q9BYV9 841 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 TTC12Q9H892 705 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-207ENST00000430858 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 AKT3Q9Y243 479 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 PPME1Q9Y570 386 aa11.01□□□□□ -0.65
HDAC6-207ENST00000430858 CDH23Q9H251 3354 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 IGKV6-21A0A0C4DH24 114 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 LINC01553A4QN01 128 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms