RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 NDST4Q9H3R1 872 aa15.78■□□□□ 0.12
CALD1-207ENST00000430085 TXNRD2Q9NNW7 524 aa15.78■□□□□ 0.12
CALD1-207ENST00000430085 RBPJLQ9UBG7 517 aa15.78■□□□□ 0.12
CALD1-207ENST00000430085 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
CALD1-207ENST00000430085 CEP350Q5VT06 3117 aa15.78■□□□□ 0.12
CALD1-207ENST00000430085 PDXKO00764 312 aa15.77■□□□□ 0.12
CALD1-207ENST00000430085 ZNF157P51786 506 aaPredicted RBP15.77■□□□□ 0.12
CALD1-207ENST00000430085 RGMBQ6NW40 437 aa15.77■□□□□ 0.12
CALD1-207ENST00000430085 ATP6V0A1Q93050 837 aa15.77■□□□□ 0.12
CALD1-207ENST00000430085 NUP58Q9BVL2 599 aa15.77■□□□□ 0.12
CALD1-207ENST00000430085 ANKEF1Q9NU02 776 aa15.77■□□□□ 0.12
CALD1-207ENST00000430085 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.12
CALD1-207ENST00000430085 ASTN1O14525 1302 aa15.77■□□□□ 0.11
CALD1-207ENST00000430085 UBE4BO95155 1302 aa15.77■□□□□ 0.11
CALD1-207ENST00000430085 PCNTO95613 3336 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 USO1O60763 962 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 CETPP11597 493 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 NR2F2P24468 414 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 NMT1P30419 496 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 ICAM3P32942 547 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 SP4Q02446 784 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 SYCP1Q15431 976 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 XKR9Q5GH70 373 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 UTP14CQ5TAP6 766 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 WDR78Q5VTH9 848 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 SEPT14Q6ZU15 432 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 PAXIP1Q6ZW49 1069 aaPredicted RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 MAEAQ7L5Y9 396 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 TRMT1LQ7Z2T5 733 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 GTF3C2Q8WUA4 911 aaPredicted RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 TIPINQ9BVW5 301 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 LARSQ9P2J5 1176 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 R3HCC1Q9Y3T6 440 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 RPL13P26373 211 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 HOXD13P35453 343 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 GTF2A2P52657 109 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 ACTR2P61160 394 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 KCTD2Q14681 263 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 DEFB115Q30KQ5 88 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 MIS18BP1Q6P0N0 1132 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 OTUD6AQ7L8S5 288 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 ZNF720Q7Z2F6 126 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 ZC3H3Q8IXZ2 948 aaKnown RBP15.76■□□□□ 0.11
CALD1-207ENST00000430085 FAM133AQ8N9E0 248 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 HHIPL1Q96JK4 782 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 ERGIC2Q96RQ1 377 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 MMP19Q99542 508 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 MROH8Q9H579 483 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 ABHD10Q9NUJ1 306 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 PCDHB13Q9Y5F0 798 aa15.76■□□□□ 0.11
CALD1-207ENST00000430085 BACH1O14867 736 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 ZSCAN12O43309 604 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 TNNT1P13805 278 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 KRT9P35527 623 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 MKRN3Q13064 507 aaKnown RBP15.75■□□□□ 0.11
CALD1-207ENST00000430085 GRM1Q13255 1194 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 PTPN14Q15678 1187 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 Q3C1V9 767 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 SWSAP1Q6NVH7 229 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.75■□□□□ 0.11
CALD1-207ENST00000430085 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 SMCR8Q8TEV9 937 aaPredicted RBP15.75■□□□□ 0.11
CALD1-207ENST00000430085 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
CALD1-207ENST00000430085 LUC7L2Q9Y383 392 aaKnown RBP15.75■□□□□ 0.11
CALD1-207ENST00000430085 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 NKRFO15226 690 aaKnown RBP eCLIP15.74■□□□□ 0.11
CALD1-207ENST00000430085 SORBS3O60504 671 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 EDNRBP24530 442 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 MARSP56192 900 aaKnown RBP15.74■□□□□ 0.11
CALD1-207ENST00000430085 ERVK-9P63128 1117 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 ERVK-24P63145 666 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 MAPK7Q13164 816 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
CALD1-207ENST00000430085 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
CALD1-207ENST00000430085 PLA2G4FQ68DD2 849 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 CYFIP1Q7L576 1253 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 DAW1Q8N136 415 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 IQCDQ96DY2 449 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 PPP1R13BQ96KQ4 1090 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 SH2D3AQ9BRG2 576 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 CAPN11Q9UMQ6 739 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.74■□□□□ 0.11
CALD1-207ENST00000430085 CCL15-CCL14A0A0B4J2E2 113 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 K7ENM7 598 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 NR3C1P04150 777 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 PGK2P07205 417 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 CYP2C8P10632 490 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 SP2Q02086 613 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 KCNA1Q09470 495 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 CCL15Q16663 113 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 FIZ1Q96SL8 496 aa15.74■□□□□ 0.11
CALD1-207ENST00000430085 MYH11P35749 1972 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms