RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 KIF3AQ9Y496 699 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 GRXCR1A8MXD5 290 aa19.58■□□□□ 0.72
CTSD-203ENST00000429746 PARNO95453 639 aaKnown RBP19.58■□□□□ 0.72
CTSD-203ENST00000429746 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.72
CTSD-203ENST00000429746 FAM167AQ96KS9 214 aa19.58■□□□□ 0.72
CTSD-203ENST00000429746 FAM161BQ96MY7 647 aa19.58■□□□□ 0.72
CTSD-203ENST00000429746 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.58■□□□□ 0.72
CTSD-203ENST00000429746 TCEAL9Q9UHQ7 104 aa19.58■□□□□ 0.72
CTSD-203ENST00000429746 IGKV6-21A0A0C4DH24 114 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 POTEMA6NI47 508 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 ZBTB39O15060 712 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 SLITRK3O94933 977 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 TXKP42681 527 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 PSMC5P62195 406 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 MRPS6P82932 125 aaKnown RBP19.57■□□□□ 0.72
CTSD-203ENST00000429746 LPIN1Q14693 890 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 RAB30Q15771 203 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 IL17AQ16552 155 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 XKR3Q5GH77 459 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 LARP1BQ659C4 914 aaKnown RBP19.57■□□□□ 0.72
CTSD-203ENST00000429746 NCAPH2Q6IBW4 605 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 TRMT1LQ7Z2T5 733 aaKnown RBP19.57■□□□□ 0.72
CTSD-203ENST00000429746 DBF4BQ8NFT6 615 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 DYDC2Q96IM9 177 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 SH2D3AQ9BRG2 576 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 FAM49AQ9H0Q0 323 aaPredicted RBP19.57■□□□□ 0.72
CTSD-203ENST00000429746 CDHR5Q9HBB8 845 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 PCDHA12Q9UN75 941 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 CDY2AQ9Y6F7 541 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 CUL9Q8IWT3 2517 aa19.57■□□□□ 0.72
CTSD-203ENST00000429746 TRANK1O15050 2925 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 KDM3AQ9Y4C1 1321 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 P4HBP07237 508 aaKnown RBP19.56■□□□□ 0.72
CTSD-203ENST00000429746 OR52Z1P0C646 297 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 SPATA31C1P0DKV0 1188 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 QARSP47897 775 aaKnown RBP19.56■□□□□ 0.72
CTSD-203ENST00000429746 DRP2Q13474 957 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 FBXO47Q5MNV8 452 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 CNKSR3Q6P9H4 555 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 C4orf19Q8IY42 314 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 CKAP2LQ8IYA6 745 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 TNPO1Q92973 898 aaKnown RBP19.56■□□□□ 0.72
CTSD-203ENST00000429746 TIFAQ96CG3 184 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 EIF2AK1Q9BQI3 630 aaKnown RBP19.56■□□□□ 0.72
CTSD-203ENST00000429746 LXNQ9BS40 222 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 COL4A6Q14031 1691 aa19.56■□□□□ 0.72
CTSD-203ENST00000429746 LYPLA2O95372 231 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 BAG4O95429 457 aaKnown RBP19.55■□□□□ 0.72
CTSD-203ENST00000429746 ACTN1P12814 892 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 SYT1P21579 422 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 PBX2P40425 430 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 TMEM62Q0P6H9 643 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 PLA2G4FQ68DD2 849 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 TMEM40Q8WWA1 233 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 PBX4Q9BYU1 374 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 ZNF576Q9H609 170 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 AGO3Q9H9G7 860 aaKnown RBP19.55■□□□□ 0.72
CTSD-203ENST00000429746 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 A0A0C4DFX4 3053 aa19.55■□□□□ 0.72
CTSD-203ENST00000429746 EYSQ5T1H1 3165 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 GPR32O75388 356 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 BAIAP3O94812 1187 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 CLCN3P51790 818 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 NPEPPSP55786 919 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 WDR5P61964 334 aaKnown RBP19.54■□□□□ 0.72
CTSD-203ENST00000429746 DEFB103AP81534 67 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 CYP4A11Q02928 519 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 PTGDRQ13258 359 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 CTTNQ14247 550 aaKnown RBP19.54■□□□□ 0.72
CTSD-203ENST00000429746 LRRC71Q8N4P6 559 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 FTOQ9C0B1 505 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTSD-203ENST00000429746 NRBP2Q9NSY0 501 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 SEPT9Q9UHD8 586 aaPredicted RBP19.54■□□□□ 0.72
CTSD-203ENST00000429746 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
CTSD-203ENST00000429746 CEP131Q9UPN4 1083 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 MTMR6Q9Y217 621 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 SLC4A7Q9Y6M7 1214 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 MYH15Q9Y2K3 1946 aa19.54■□□□□ 0.72
CTSD-203ENST00000429746 H3BQV1 296 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 MED24O75448 989 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 GHRP10912 638 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 FXR2P51116 673 aaKnown RBP eCLIP19.53■□□□□ 0.72
CTSD-203ENST00000429746 RESTQ13127 1097 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
CTSD-203ENST00000429746 MTERF2Q49AM1 385 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 NME8Q8N427 588 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 IGSF22Q8N9C0 903 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 LINC01599Q8WXQ3 324 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 CELF4Q9BZC1 486 aaKnown RBP19.53■□□□□ 0.72
CTSD-203ENST00000429746 ADAMTS10Q9H324 1103 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 YBX2Q9Y2T7 364 aaKnown RBP19.53■□□□□ 0.72
CTSD-203ENST00000429746 TRPV2Q9Y5S1 764 aa19.53■□□□□ 0.72
CTSD-203ENST00000429746 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.52■□□□□ 0.72
CTSD-203ENST00000429746 MAGEB2O15479 319 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 MAFO75444 373 aaPredicted RBP19.52■□□□□ 0.72
CTSD-203ENST00000429746 VTNP04004 478 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 TECP42680 631 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms