RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 HAUS3Q68CZ6 603 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 PABPN1LA6NDY0 278 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 MTRF1O75570 445 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 SPARCL1Q14515 664 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 DTX3LQ8TDB6 740 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TTC7AQ9ULT0 858 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ZDHHC9Q9Y397 364 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 MON2Q7Z3U7 1717 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF589Q86UQ0 364 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 SCYL3Q8IZE3 742 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF398Q8TD17 642 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 HEXIM1O94992 359 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 PSMA4P25789 261 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 COPS2P61201 443 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 KRT76Q01546 638 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 GSTA5Q7RTV2 222 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 C2CD5Q86YS7 1000 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 CALML6Q8TD86 181 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ANGPTL3Q9Y5C1 460 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 VWA5AO00534 786 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ATP1A2P50993 1020 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 GALNT17Q6IS24 598 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TRMT10CQ7L0Y3 403 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 CCT7Q99832 543 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TAB2Q9NYJ8 693 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 A0A087WWV3 80 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TTI1O43156 1089 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ITGA6P23229 1130 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ANKRD13AQ8IZ07 590 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ATPIF1Q9UII2 106 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 KCNJ14Q9UNX9 436 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 STK38LQ9Y2H1 464 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 PIK3C2BO00750 1634 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TCHHL1Q5QJ38 904 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 SRRM1Q8IYB3 904 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF532Q9HCE3 1301 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 UBTFL6P0CB48 400 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 MLH1P40692 756 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 STAT2P52630 851 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SLC39A14Q15043 492 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 KRT79Q5XKE5 535 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ATG16L1Q676U5 607 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 MYL10Q9BUA6 226 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 VPS54Q9P1Q0 977 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 NEXMIFQ5QGS0 1516 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 FGAP02671 866 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 RAD23BP54727 409 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SETD3Q86TU7 594 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 TRIM11Q96F44 468 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ANKRD36BP1Q96IX9 119 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 DDX23Q9BUQ8 820 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 CCDC134Q9H6E4 229 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 PTTG2Q9NZH5 202 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 MBD2Q9UBB5 411 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ATP11BQ9Y2G3 1177 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 R3HDM2Q9Y2K5 976 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 DLC1Q96QB1 1528 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 NDUFA10O95299 355 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 GCP02774 474 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 CCDC15Q0P6D6 951 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SPDYAQ5MJ70 313 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 BEST2Q8NFU1 509 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 RIN3Q8TB24 985 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 KCNK9Q9NPC2 374 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SORCS3Q9UPU3 1222 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 TAF5LO75529 589 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 RPSAP08865 295 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 FAM89AQ96GI7 184 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 XAB2Q9HCS7 855 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 PCDH11XQ9BZA7 1347 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 PCDH11YQ9BZA8 1340 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 FKBP6O75344 327 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ATP4AP20648 1035 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 MAP3K10Q02779 954 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SNX1Q13596 522 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 NECTIN1Q15223 517 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF554Q86TJ5 538 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 CEP70Q8NHQ1 597 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF473Q8WTR7 871 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 AMFRQ9UKV5 643 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 COQ9O75208 318 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 LARGE1O95461 756 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 FOSL1P15407 271 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 KCNB1Q14721 858 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 PARP6Q2NL67 630 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SFMBT2Q5VUG0 894 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 GRPEL2Q8TAA5 225 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 BLZF1Q9H2G9 400 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms