RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 H3BRB1 525 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 GTPBP6O43824 516 aaPredicted RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 GJB1P08034 283 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 ZNF286BP0CG31 522 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 BEX3Q00994 111 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 GNASQ5JWF2 1037 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 BBXQ8WY36 941 aaPredicted RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 TRIM9Q9C026 710 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 XRN2Q9H0D6 950 aaKnown RBP eCLIP19■□□□□ 0.63
LINC00887-203ENST00000429578 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 NRBP2Q9NSY0 501 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 SEPT9Q9UHD8 586 aaPredicted RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 TRIP12Q14669 1992 aaPredicted RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 ARHGEF35A5YM69 484 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 TMEM150BA6NC51 233 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 MYADML2A6NDP7 307 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 PRR29P0C7W0 189 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 MARK3P27448 753 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 GJA8P48165 433 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 PLCB4Q15147 1175 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 XKR9Q5GH70 373 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 PLA2G4FQ68DD2 849 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 GPBP1Q86WP2 473 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 ATP8B4Q8TF62 1192 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 CCDC43Q96MW1 224 aaKnown RBP19■□□□□ 0.63
LINC00887-203ENST00000429578 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 UNC93B1Q9H1C4 597 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 KCND2Q9NZV8 630 aa19■□□□□ 0.63
LINC00887-203ENST00000429578 MYMKA6NI61 221 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 KPNA6O60684 536 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 LETM1O95202 739 aaPredicted RBP18.99■□□□□ 0.63
LINC00887-203ENST00000429578 F2P00734 622 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 CYP11B2P19099 503 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 CST5P28325 142 aaPredicted RBP18.99■□□□□ 0.63
LINC00887-203ENST00000429578 DPYDQ12882 1025 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 CUL4BQ13620 913 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 LHX8Q68G74 356 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 RINT1Q6NUQ1 792 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 CNNM4Q6P4Q7 775 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 KLHDC9Q8NEP7 349 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 ERCC4Q92889 916 aaPredicted RBP18.99■□□□□ 0.63
LINC00887-203ENST00000429578 CEP170P1Q96L14 293 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 BLZF1Q9H2G9 400 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 BMP2KQ9NSY1 1161 aaPredicted RBP18.99■□□□□ 0.63
LINC00887-203ENST00000429578 KIAA1468Q9P260 1216 aa18.99■□□□□ 0.63
LINC00887-203ENST00000429578 ZEB2O60315 1214 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 CASP1P29466 404 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 NPEPPSP55786 919 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 PURAQ00577 322 aaKnown RBP18.98■□□□□ 0.63
LINC00887-203ENST00000429578 ZSCAN23Q3MJ62 389 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 ARSHQ5FYA8 562 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 SPATA20Q8TB22 786 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 DDX12PQ92771 950 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 SH2D3AQ9BRG2 576 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 RNPEPQ9H4A4 650 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
LINC00887-203ENST00000429578 CYP26B1Q9NR63 512 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 PCDHA5Q9Y5H7 936 aa18.98■□□□□ 0.63
LINC00887-203ENST00000429578 HBP1O60381 514 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 MYL3P08590 195 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 NT5DC1Q5TFE4 455 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 PADI6Q6TGC4 694 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 RNF180Q86T96 592 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 U2AF1L4Q8WU68 220 aaKnown RBP18.97■□□□□ 0.63
LINC00887-203ENST00000429578 KAT2BQ92831 832 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 RUSC1Q9BVN2 902 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
LINC00887-203ENST00000429578 SMC2O95347 1197 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 TARBP2Q15633 366 aaKnown RBP18.97■□□□□ 0.63
LINC00887-203ENST00000429578 MTERF2Q49AM1 385 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 DYMQ7RTS9 669 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 PCSK9Q8NBP7 692 aaKnown RBP18.97■□□□□ 0.63
LINC00887-203ENST00000429578 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 KATNAL1Q9BW62 490 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 TUBE1Q9UJT0 475 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 TRPC6Q9Y210 931 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 PPME1Q9Y570 386 aa18.97■□□□□ 0.63
LINC00887-203ENST00000429578 SGPL1O95470 568 aa18.96■□□□□ 0.63
LINC00887-203ENST00000429578 SARSP49591 514 aaKnown RBP18.96■□□□□ 0.63
LINC00887-203ENST00000429578 CCSAPQ6IQ19 270 aaPredicted RBP18.96■□□□□ 0.63
LINC00887-203ENST00000429578 DNAJC19Q96DA6 116 aa18.96■□□□□ 0.63
LINC00887-203ENST00000429578 GSDMAQ96QA5 445 aa18.96■□□□□ 0.63
LINC00887-203ENST00000429578 SYCE3A1L190 88 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 HAS3O00219 553 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 DGAT1O75907 488 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 KRT18P05783 430 aaKnown RBP18.95■□□□□ 0.62
LINC00887-203ENST00000429578 GUCY2CP25092 1073 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 ASIC1P78348 528 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 GIT2Q14161 759 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 KCNA10Q16322 511 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 CEP89Q96ST8 783 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 MTG1Q9BT17 334 aaPredicted RBP18.95■□□□□ 0.62
LINC00887-203ENST00000429578 ANP32EQ9BTT0 268 aa18.95■□□□□ 0.62
LINC00887-203ENST00000429578 ZBTB42B2RXF5 422 aa18.94■□□□□ 0.62
LINC00887-203ENST00000429578 KLRC4O43908 158 aa18.94■□□□□ 0.62
LINC00887-203ENST00000429578 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
LINC00887-203ENST00000429578 RPN1P04843 607 aaKnown RBP18.94■□□□□ 0.62
LINC00887-203ENST00000429578 ASGR1P07306 291 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms