RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 DPPA5A6NC42 116 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 OAS1P00973 400 aaKnown RBP17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 CTCFP49711 727 aaPredicted RBP17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 DR1Q01658 176 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 BNIP1Q12981 228 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 RPTORQ8N122 1335 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 TBCKQ8TEA7 893 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 GJA10Q969M2 543 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 UIMC1Q96RL1 719 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 AJAP1Q9UKB5 411 aaPredicted RBP17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 ATP4AP20648 1035 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 EPS15P42566 896 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 RAB27AP51159 221 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 NAPAP54920 295 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 TFAP4Q01664 338 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 CHRNDQ07001 517 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 COASYQ13057 564 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 NONOQ15233 471 aaKnown RBP eCLIP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 AADACL2Q6P093 401 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 FITM2Q8N6M3 262 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 DAGLBQ8NCG7 672 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 HOMER3Q9NSC5 361 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 TMEM260Q9NX78 707 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 SPDYE5A6NIY4 337 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 CCDC169A6NNP5 214 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 BTNL10A8MVZ5 291 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 ECM1Q16610 540 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 DUPD1Q68J44 220 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 NAF1Q96HR8 494 aaKnown RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 RMDN2Q96LZ7 410 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 NSRP1Q9H0G5 558 aaKnown RBP17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 PIDD1Q9HB75 910 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 ARHGEF3Q9NR81 526 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 ARAP2Q8WZ64 1704 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 MYH3P11055 1940 aa17.8■□□□□ 0.44
RHBDF1-204ENST00000428730 PECAM1P16284 738 aaPredicted RBP17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 RBBP5Q15291 538 aaKnown RBP17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 DYDC1Q8WWB3 177 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 RAD54LQ92698 747 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 SLC37A4O43826 429 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 PDHA1P08559 390 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 PDE6CP51160 858 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 RWDD2BP57060 319 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 DYNLL2Q96FJ2 89 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 ERP44Q9BS26 406 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 RAB17Q9H0T7 212 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 TMOD3Q9NYL9 352 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 SUCLA2Q9P2R7 463 aaPredicted RBP17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 DAAM1Q9Y4D1 1078 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 COL18A1P39060 1754 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 DLEC1Q9Y238 1755 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 KCNH2Q12809 1159 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 GJB7Q6PEY0 223 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 CCDC134Q9H6E4 229 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 CASZ1Q86V15 1759 aa17.79■□□□□ 0.44
RHBDF1-204ENST00000428730 LRP5O75197 1615 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 ARHGAP27Q6ZUM4 889 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 SLFN11Q7Z7L1 901 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 PROM2Q8N271 834 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 HES6Q96HZ4 224 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 CPSF2Q9P2I0 782 aaKnown RBP17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 STARD3NLO95772 234 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 USP17L8P0C7I0 530 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 GNAT1P11488 350 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 ZNF131P52739 623 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 PTENP60484 403 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 PLS1Q14651 629 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 ASRGL1Q7L266 308 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 JAMLQ86YT9 394 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 ANKRD42Q8N9B4 389 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 ANKLE1Q8NAG6 615 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 GDAP1Q8TB36 358 aa17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 UTP4Q969X6 686 aaKnown RBP17.78■□□□□ 0.44
RHBDF1-204ENST00000428730 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms