RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MRE11P49959 708 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SOX10P56693 466 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 UBE2HP62256 183 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 RAD51Q06609 339 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 KIF5AQ12840 1032 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 KRT81Q14533 505 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ARHGAP15Q53QZ3 475 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CYP4A22Q5TCH4 519 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 BSPRYQ5W0U4 402 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CDC42EP5Q6NZY7 148 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 AFG1LQ8WV93 481 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 C2orf40Q9H1Z8 148 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 LUC7L2Q9Y383 392 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SLC4A7Q9Y6M7 1214 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 GOLGA6L7A0A1B0GV03 622 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 GOLGA8CPA6NN73 597 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 F8W8V4 182 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CLDN3O15551 220 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 IGHDP01880 384 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SLC12A2P55011 1212 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF568Q3ZCX4 644 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ACCSLQ4AC99 568 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SLFN12LQ6IEE8 588 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SWSAP1Q6NVH7 229 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 OTUD7AQ8TE49 926 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 SEPT1Q8WYJ6 367 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 VCPKMTQ9H867 229 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 PIH1D3Q9NQM4 214 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 DONSONQ9NYP3 566 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 BCCIPQ9P287 314 aaKnown RBP eCLIP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 LSM7Q9UK45 103 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 KCNH3Q9ULD8 1083 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 IRF6O14896 467 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 POLR2DO15514 142 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 KPNA6O60684 536 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 LRG1P02750 347 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CYP2D6P10635 497 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CCL5P13501 91 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 UBE2SQ16763 222 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ATL3Q6DD88 541 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 VGLL2Q8N8G2 317 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 TBCKQ8TEA7 893 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 TTC1Q99614 292 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 MSTO1Q9BUK6 570 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 IGFLR1Q9H665 355 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ARMCX3Q9UH62 379 aaPredicted RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
CNOT4-206ENST00000428680 TACC1O75410 805 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 MOCS3O95396 460 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 OR1G1P47890 313 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 NR1H3Q13133 447 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CASC4Q6P4E1 433 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 EFCAB13Q8IY85 973 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 DEFB118Q96PH6 123 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 ACCSQ96QU6 501 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CTTNBP2NLQ9P2B4 639 aa7.88□□□□□ -1.15
CNOT4-206ENST00000428680 CARNS1A5YM72 827 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 SFNP31947 248 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 LAMC2Q13753 1193 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 BTG3Q14201 252 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 GSE1Q14687 1217 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 HADHQ16836 314 aaKnown RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 SEL1L2Q5TEA6 688 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 TEPSINQ96N21 525 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PPP1R9BQ96SB3 815 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 H0YHG0 523 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 MAGEB2O15479 319 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 TERF1P54274 439 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 ZMYM1Q5SVZ6 1142 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 ATG4CQ96DT6 458 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 NCAPGQ9BPX3 1015 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 TRPC7Q9HCX4 862 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 EHD2Q9NZN4 543 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 GABBR1Q9UBS5 961 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PRG3Q9Y2Y8 225 aaPredicted RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 A0A0D9SFI3 127 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 A0A1W2PRG0 241 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 A6NJR5 290 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 C2CD2LO14523 706 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 OAZ1P54368 228 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 PTPROQ16827 1216 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 APOBEC3HQ6NTF7 200 aaKnown RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 METTL16Q86W50 562 aaKnown RBP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 BACH2Q9BYV9 841 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.87□□□□□ -1.15
CNOT4-206ENST00000428680 USP25Q9UHP3 1055 aa7.87□□□□□ -1.15
CNOT4-206ENST00000428680 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms