RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRCH3-204ENST00000428136 TRIM34Q9BYJ4 488 aa8.6□□□□□ -1.03
LRCH3-204ENST00000428136 PLEKHA4Q9H4M7 779 aa8.6□□□□□ -1.03
LRCH3-204ENST00000428136 GGA2Q9UJY4 613 aa8.6□□□□□ -1.03
LRCH3-204ENST00000428136 USP21Q9UK80 565 aa8.6□□□□□ -1.03
LRCH3-204ENST00000428136 PACSIN2Q9UNF0 486 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-204ENST00000428136 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
LRCH3-204ENST00000428136 OPLAHO14841 1288 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 MSH4O15457 936 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TOM1O60784 492 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 KRT14P02533 472 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 MUTP22033 750 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 KCNA4P22459 653 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ITGB3BPQ13352 177 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PRR16Q569H4 304 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TMEM174Q8WUU8 243 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ATP6V1G3Q96LB4 118 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 HSD17B14Q9BPX1 270 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TMBIM4Q9HC24 238 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PI4KBQ9UBF8 816 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 AJAP1Q9UKB5 411 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 COL2A1P02458 1487 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 UBE4BO95155 1302 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ZMYM2Q9UBW7 1377 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 IGLV3-22A0A075B6J6 115 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ESYT3A0FGR9 886 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SHTN1A0MZ66 631 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 MPHOSPH10O00566 681 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 DDX3XO00571 662 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 KCNK3O14649 394 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TGFB1I1O43294 461 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 FERP16591 822 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 CRKP46108 304 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 CCT5P48643 541 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TRADDQ15628 312 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SPDYCQ5MJ68 293 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TADA2BQ86TJ2 420 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PACS2Q86VP3 889 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SYCE1Q8N0S2 351 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 METTL13Q8N6R0 699 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 IFT81Q8WYA0 676 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SLITRK6Q9H5Y7 841 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 NCANO14594 1321 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PGRMC1O00264 195 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 POU5F1Q01860 360 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 ARID5AQ03989 594 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TCEAL1Q15170 157 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 CERKLQ49MI3 558 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 TMEM179Q6ZVK1 233 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 YTHDF3Q7Z739 585 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 NT5DC3Q86UY8 548 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 SPAG5Q96R06 1193 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 EPN3Q9H201 632 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 DMAC2Q9NW81 257 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 FAM198AQ9UFP1 575 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 DIS3Q9Y2L1 958 aaKnown RBP8.59□□□□□ -1.03
LRCH3-204ENST00000428136 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
LRCH3-204ENST00000428136 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 H2AFZP0C0S5 128 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 CASP4P49662 377 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 SCNN1DP51172 638 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 ZNF131P52739 623 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 RINT1Q6NUQ1 792 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 C1orf186Q6ZWK4 172 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 H2AFVQ71UI9 128 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 B4GALNT4Q76KP1 1039 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 FIZ1Q96SL8 496 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 EIF2AK1Q9BQI3 630 aaKnown RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 RUSC1Q9BVN2 902 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 STK33Q9BYT3 514 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 FRMPD4Q14CM0 1322 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 DDTLA6NHG4 134 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 F5H6K3 240 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 MEIS1O00470 390 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 NPR1P16066 1061 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 LSP1P33241 339 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 HSD17B3P37058 310 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 MCCD1P59942 119 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 PPATQ06203 517 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 KLRC3Q07444 240 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 PPP2R5CQ13362 524 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 UAP1Q16222 522 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 TTC31Q49AM3 519 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 SYDE2Q5VT97 1194 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 C3orf20Q8ND61 904 aa8.58□□□□□ -1.04
LRCH3-204ENST00000428136 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-204ENST00000428136 GPR88Q9GZN0 384 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms