RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 DFFAO00273 331 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 GCLMP48507 274 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 YAF2Q8IY57 180 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 HIPK4Q8NE63 616 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 IFT43Q96FT9 208 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 RNF40O75150 1001 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 PCGF5Q86SE9 256 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 LRRC8AQ8IWT6 810 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 EPB41L5Q9HCM4 733 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 ZNF302Q9NR11 478 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 MINPP1Q9UNW1 487 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 SH2B2O14492 632 aaPredicted RBP14.17□□□□□ -0.14
SPG11-202ENST00000427534 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
SPG11-202ENST00000427534 CUL4AQ13619 759 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 B4GALNT4Q76KP1 1039 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 SUFUQ9UMX1 484 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 EFCAB8A8MWE9 144 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 INPP1P49441 399 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 ANKARQ7Z5J8 1434 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 KIF3CO14782 793 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 MED7O43513 233 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 CLTAP09496 248 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 EPN1Q9Y6I3 576 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 HDLBPQ00341 1268 aaKnown RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 CEP95Q96GE4 821 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 SUCLA2Q9P2R7 463 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 PASKQ96RG2 1323 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 KIF19Q2TAC6 998 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 CYB5R4Q7L1T6 521 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 FAF2Q96CS3 445 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 KLHL11Q9NVR0 708 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 MMP1P03956 469 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 MAP7Q14244 749 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 MFSD14CQ5VZR4 134 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 DHX36Q9H2U1 1008 aaKnown RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 BSDC1Q9NW68 430 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 CLDN3O15551 220 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 FAM133BQ5BKY9 247 aaKnown RBP14.16□□□□□ -0.14
SPG11-202ENST00000427534 AGR3Q8TD06 166 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 EDEM3Q9BZQ6 932 aa14.16□□□□□ -0.14
SPG11-202ENST00000427534 TRPA1O75762 1119 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 AP1B1Q10567 949 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 CROCCP2Q86T23 111 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 ADAM33Q9BZ11 813 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 COG4Q9H9E3 785 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 KLHL14Q9P2G3 628 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 PLA2R1Q13018 1463 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 SYF2O95926 243 aaKnown RBP14.15□□□□□ -0.14
SPG11-202ENST00000427534 MSH2P43246 934 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 MXI1P50539 228 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 KIF23Q02241 960 aaPredicted RBP14.15□□□□□ -0.14
SPG11-202ENST00000427534 TMEM270Q6UE05 265 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 KCTD17Q8N5Z5 321 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 GRIK1P39086 918 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
SPG11-202ENST00000427534 LMNTD2Q8IXW0 634 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 M0QYV0 167 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 OXER1Q8TDS5 423 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 MAML1Q92585 1016 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 TLK1Q9UKI8 766 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 POTEFA5A3E0 1075 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 ZNF500O60304 480 aaPredicted RBP14.15□□□□□ -0.14
SPG11-202ENST00000427534 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 FCER1AP12319 257 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 GPC3P51654 580 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 ZNF699Q32M78 642 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
SPG11-202ENST00000427534 FSD1LQ9BXM9 530 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 SNX19Q92543 992 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 GSDMAQ96QA5 445 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 MAGEF1Q9HAY2 307 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 CAPN7Q9Y6W3 813 aa14.15□□□□□ -0.14
SPG11-202ENST00000427534 EIF4A3P38919 411 aaKnown RBP14.14□□□□□ -0.15
SPG11-202ENST00000427534 LBHD1Q9BQE6 289 aaPredicted RBP14.14□□□□□ -0.15
SPG11-202ENST00000427534 E2F8A0AVK6 867 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 POTECB2RU33 542 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 LAD1O00515 517 aa14.14□□□□□ -0.15
SPG11-202ENST00000427534 ACSL3O95573 720 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms