RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR52E8Q6IFG1 317 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 OLFML1Q6UWY5 402 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PI16Q6UXB8 463 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RNF19BQ6ZMZ0 732 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMTC3Q6ZXV5 915 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ASRGL1Q7L266 308 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 APTXQ7Z2E3 356 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 VSIG1Q86XK7 387 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 LRRC49Q8IUZ0 686 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 NOSTRINQ8IVI9 506 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 NELFCDQ8IXH7 590 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PEX5LQ8IYB4 626 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MB21D1Q8N884 522 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SCAIQ8N9R8 606 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 HELBQ8NG08 1087 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 NCOA7Q8NI08 942 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 CXorf38Q8TB03 319 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 DQX1Q8TE96 717 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 AZIN2Q96A70 460 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 MAGOHBQ96A72 148 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 IFT43Q96FT9 208 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 DHTKD1Q96HY7 919 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ABHD8Q96I13 439 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM227BQ96M60 508 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF317Q96PQ6 595 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 RPS6KC1Q96S38 1066 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF184Q99676 751 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SELENOSQ9BQE4 189 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ALG1Q9BT22 464 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMEM60Q9H2L4 133 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 ETNK1Q9HBU6 452 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SAMSN1Q9NSI8 373 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 QPCTLQ9NXS2 382 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 C9orf78Q9NZ63 289 aaPredicted RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 DMGDHQ9UI17 866 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 STK38LQ9Y2H1 464 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SRPRBQ9Y5M8 271 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 FADS3Q9Y5Q0 445 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 PTPRMP28827 1452 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 BCL9LQ86UU0 1499 aa6.07□□□□□ -1.44
VTI1BP4-201ENST00000427516 AKAP12Q02952 1782 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SOS2Q07890 1332 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM187AA6NFU0 413 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 BTNL10A8MVZ5 291 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PGRMC1O00264 195 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRAFD1O14545 582 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 POLR2DO15514 142 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TEX33O43247 280 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MGEA5O60502 916 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 UBOX5O94941 541 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PARNO95453 639 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 CTDNEP1O95476 244 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ASLP04424 464 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PDHA1P08559 390 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 CYP21A2P08686 494 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TPBGLP0DKB5 382 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SRGNP10124 158 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 LMNB1P20700 586 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PAX3P23760 479 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MARK3P27448 753 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MARCKSP29966 332 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MATR3P43243 847 aaKnown RBP eCLIP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 GUCY2FP51841 1108 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 HERVK_113P62684 666 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ARHGAP4P98171 946 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 FMR1Q06787 632 aaKnown RBP eCLIP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MCL1Q07820 350 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 STRN3Q13033 797 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 NR1H3Q13133 447 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 LIN52Q52LA3 116 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 BEND3Q5T5X7 828 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF658Q5TYW1 1059 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 FYB2Q5VWT5 728 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PCNX4Q63HM2 1172 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MARK2Q7KZI7 788 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 DAAM2Q86T65 1068 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZC3H18Q86VM9 953 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF398Q8TD17 642 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ACTRT1Q8TDG2 376 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRPC4APQ8TEL6 797 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SYN2Q92777 582 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 CASP10Q92851 521 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ATP6V0A1Q93050 837 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZNF333Q96JL9 665 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TMEM87BQ96K49 555 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SH3GL1Q99961 368 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 TRAIPQ9BWF2 469 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 UBE2OQ9C0C9 1292 aaKnown RBP6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PHACTR1Q9C0D0 580 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 PREBQ9HCU5 417 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 SAR1AQ9NR31 198 aa6.06□□□□□ -1.44
VTI1BP4-201ENST00000427516 FGFR1OP2Q9NVK5 253 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms