RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
PDAP1-202ENST00000426447 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 ATP6V0A4Q9HBG4 840 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 ENTPD7Q9NQZ7 604 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 KCNH7Q9NS40 1196 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 ST3GAL5Q9UNP4 418 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 NOC2LQ9Y3T9 749 aaKnown RBP16.75■□□□□ 0.27
PDAP1-202ENST00000426447 NR2E1Q9Y466 385 aa16.75■□□□□ 0.27
PDAP1-202ENST00000426447 CCDC69A6NI79 296 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 MGEA5O60502 916 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 PLEKHA8P1O95397 391 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 PDGFBP01127 241 aaPredicted RBP16.74■□□□□ 0.27
PDAP1-202ENST00000426447 LAG3P18627 525 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 ANTXR2P58335 489 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 KREMEN2Q8NCW0 462 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 MRPS27Q92552 414 aaKnown RBP16.74■□□□□ 0.27
PDAP1-202ENST00000426447 TCF25Q9BQ70 676 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 MXRA8Q9BRK3 442 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 CDHR5Q9HBB8 845 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 LY9Q9HBG7 655 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
PDAP1-202ENST00000426447 hCG_1642624A0A1W2PR95 340 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 BACH1O14867 736 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 FSCN2O14926 492 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 FGFR1P11362 822 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 HOXB8P17481 243 aaPredicted RBP16.73■□□□□ 0.27
PDAP1-202ENST00000426447 SLC26A2P50443 739 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 FOXK2Q01167 660 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 KRT17Q04695 432 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 TMTC2Q8N394 836 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 NGRNQ9NPE2 291 aaKnown RBP16.73■□□□□ 0.27
PDAP1-202ENST00000426447 HCSTQ9UBK5 93 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
PDAP1-202ENST00000426447 NFASCO94856 1347 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 TRIOO75962 3097 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 C9IYK1 514 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
PDAP1-202ENST00000426447 HBP1O60381 514 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 ARP10275 920 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 MTMR3Q13615 1198 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 FAM160B1Q5W0V3 765 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 CES5AQ6NT32 575 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 SYCE2Q6PIF2 218 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 HEATR3Q7Z4Q2 680 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
PDAP1-202ENST00000426447 UBALD2Q8IYN6 164 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 CWH43Q9H720 699 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 TMEM161AQ9NX61 479 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
PDAP1-202ENST00000426447 HIDE1A8MVS5 230 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 PRC1O43663 620 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 CALM1P0DP23 149 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 CALM2P0DP24 149 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 CALM3P0DP25 149 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 RXRAP19793 462 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 PDE4AP27815 886 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 CA8P35219 290 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 KCNC3Q14003 757 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 ABI1Q8IZP0 508 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 CASP10Q92851 521 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 PPP1R16BQ96T49 567 aa16.71■□□□□ 0.27
PDAP1-202ENST00000426447 DDX39AO00148 427 aaKnown RBP16.7■□□□□ 0.26
PDAP1-202ENST00000426447 ATG7O95352 703 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 CHMLP26374 656 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 ZNF76P36508 570 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 CRYBB1P53674 252 aaPredicted RBP16.7■□□□□ 0.26
PDAP1-202ENST00000426447 KIZQ2M2Z5 673 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 CEP55Q53EZ4 464 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 ZNF558Q96NG5 402 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 OSMRQ99650 979 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
PDAP1-202ENST00000426447 AGO4Q9HCK5 861 aaKnown RBP16.7■□□□□ 0.26
PDAP1-202ENST00000426447 KIAA1671Q9BY89 1806 aa16.7■□□□□ 0.26
PDAP1-202ENST00000426447 PLXNA4Q9HCM2 1894 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 PROB1E7EW31 1015 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 HOXA2O43364 376 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 MCM5P33992 734 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 PPM1AP35813 382 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 FAM189BP81408 668 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 ITIH3Q06033 890 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 ITGB3BPQ13352 177 aaPredicted RBP16.69■□□□□ 0.26
PDAP1-202ENST00000426447 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
PDAP1-202ENST00000426447 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms