RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 GABPB1Q06547 395 aaPredicted RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 SLMAPQ14BN4 828 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 ADGRF4Q8IZF3 695 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 GUF1Q8N442 669 aaKnown RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■□□□ 12
SP1-202ENST00000426431 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 CEP72Q9P209 647 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 PEX3P56589 373 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 VSIG1Q86XK7 387 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 MTMR4Q9NYA4 1195 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 UBE4BO95155 1302 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 ATP2C2O75185 946 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 TOB2Q14106 344 aaPredicted RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 TFDP2Q14188 446 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 MXD4Q14582 209 aaPredicted RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 STILQ15468 1287 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 TCP11X2Q5H9J9 407 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 RBM41Q96IZ5 413 aaKnown RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 PPP4CP60510 307 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 SLC15A2Q16348 729 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 C16orf86Q6ZW13 317 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 RPAP3Q9H6T3 665 aaPredicted RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 VSTM4Q8IW00 320 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 GPT2Q8TD30 523 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 KCNB1Q14721 858 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 TTC25Q96NG3 672 aa10.97□□□□□ -0.65
SP1-202ENST00000426431 TRIM56Q9BRZ2 755 aaKnown RBP10.97□□□□□ -0.65
SP1-202ENST00000426431 CCDC188H7C350 402 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 TRAPPC3O43617 180 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 ECEL1O95672 775 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 MESDQ14696 234 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 PPP2R5DQ14738 602 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 GKAP1Q5VSY0 366 aaPredicted RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 SARM1Q6SZW1 724 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 SMAP1Q8IYB5 467 aaPredicted RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 FLT1P17948 1338 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 MAGOHBQ96A72 148 aaKnown RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 CA4P22748 312 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 LINC00116Q8NCU8 138 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 HEXIM2Q96MH2 286 aaKnown RBP10.96□□□□□ -0.65
SP1-202ENST00000426431 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 SLC9A2Q9UBY0 812 aa10.96□□□□□ -0.65
SP1-202ENST00000426431 ESYT2A0FGR8 921 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 MEIS1O00470 390 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 SORBS3O60504 671 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 EYA4O95677 639 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 INHBAP08476 426 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 CYP2D6P10635 497 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 RFC5P40937 340 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 GPC3P51654 580 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 ZNF568Q3ZCX4 644 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 TADA2BQ86TJ2 420 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 LDHDQ86WU2 507 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 STAP1Q9ULZ2 295 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 ERCC3P19447 782 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 KNOP1Q1ED39 458 aaKnown RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 DPCR1Q3MIW9 517 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 XKR3Q5GH77 459 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 DGAT1O75907 488 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 NR3C1P04150 777 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 RASSF7Q02833 373 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 IFRD2Q12894 506 aaPredicted RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 ARHGEF18Q6ZSZ5 1173 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 CCDC13Q8IYE1 715 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.66
SP1-202ENST00000426431 JPH1Q9HDC5 661 aaPredicted RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 ZNF70Q9UC06 446 aaPredicted RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.66
SP1-202ENST00000426431 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
SP1-202ENST00000426431 KRT1P04264 644 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 ATP2C1P98194 919 aaPredicted RBP10.95□□□□□ -0.66
SP1-202ENST00000426431 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 TWF2Q6IBS0 349 aaKnown RBP10.95□□□□□ -0.66
SP1-202ENST00000426431 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 HVCN1Q96D96 273 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 PGBD4Q96DM1 585 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 CABS1Q96KC9 395 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 SPATA33Q96N06 139 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 DDX50Q9BQ39 737 aaKnown RBP10.95□□□□□ -0.66
SP1-202ENST00000426431 CCSER1Q9C0I3 900 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 VCPKMTQ9H867 229 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 KLHL14Q9P2G3 628 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
SP1-202ENST00000426431 ASNSD1Q9NWL6 643 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms