RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 XRCC5P13010 732 aaKnown RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 TCP1P17987 556 aaKnown RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 NMT1P30419 496 aaKnown RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 INPP5BP32019 993 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 KCNB1Q14721 858 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 QRICH1Q2TAL8 776 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 TAB3Q8N5C8 712 aaPredicted RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 ZBED3Q96IU2 234 aaPredicted RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 JMJD4Q9H9V9 463 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 PLAGL2Q9UPG8 496 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 FAM169AQ9Y6X4 670 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 CNTNAP1P78357 1384 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 ERLIN2O94905 339 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 KRT71Q3SY84 523 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 SLFN13Q68D06 897 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 ZNRF3Q9ULT6 936 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 DNM3Q9UQ16 869 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 GOLGA6L7A0A1B0GV03 622 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 PTK2Q05397 1052 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 ALKBH5Q6P6C2 394 aaKnown RBP14.62□□□□□ -0.07
USP42-203ENST00000426246 MIGA2Q7L4E1 593 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 GLYCTKQ8IVS8 523 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 TLR10Q9BXR5 811 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 TCP10L2B9ZVM9 353 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 ITGA4P13612 1032 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 JAG1P78504 1218 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 TUBB2AQ13885 445 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 RRP1BQ14684 758 aaKnown RBP14.62□□□□□ -0.07
USP42-203ENST00000426246 DALRD3Q5D0E6 543 aaKnown RBP14.62□□□□□ -0.07
USP42-203ENST00000426246 UPF1Q92900 1129 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP42-203ENST00000426246 CCDC127Q96BQ5 260 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 TUBB2BQ9BVA1 445 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 SH3GLB2Q9NR46 395 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 PLAAQ9Y263 795 aa14.62□□□□□ -0.07
USP42-203ENST00000426246 RAD51CO43502 376 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 ENTPD3O75355 529 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 GCNT4Q9P109 453 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 GOLGA8IPA6NC78 632 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 GOLGA8JA6NMD2 632 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 DAPK3O43293 454 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 MED24O75448 989 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 TTLL1O95922 423 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 EEF2P13639 858 aaKnown RBP14.61□□□□□ -0.07
USP42-203ENST00000426246 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 CXCL9Q07325 125 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 PDXDC1Q6P996 788 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 PACS2Q86VP3 889 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 MTMR14Q8NCE2 650 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 HNRNPLLQ8WVV9 542 aaKnown RBP14.61□□□□□ -0.07
USP42-203ENST00000426246 AK8Q96MA6 479 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 SCLT1Q96NL6 688 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 TRIM51Q9BSJ1 452 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 POLD1P28340 1107 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 CAPN12Q6ZSI9 719 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 C7orf25Q9BPX7 421 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 RIOX1Q9H6W3 641 aa14.61□□□□□ -0.07
USP42-203ENST00000426246 PPFIA4O75335 1185 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 KCNMA1Q12791 1236 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 TRIP13Q15645 432 aaPredicted RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 CDC37Q16543 378 aaPredicted RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 PAPD7Q5XG87 772 aaKnown RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 NSMFQ6X4W1 530 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 ELOA2Q8IYF1 753 aaPredicted RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 LZTS2Q9BRK4 669 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 ACP6Q9NPH0 428 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 NOVA2Q9UNW9 492 aaKnown RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 MYO1FO00160 1098 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 PPFIA1Q13136 1202 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 COG2Q14746 738 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 CERKLQ49MI3 558 aaPredicted RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 CCDC38Q502W7 563 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 C2CD6Q53TS8 623 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 THOC1Q96FV9 657 aaKnown RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 ATMINO43313 823 aaPredicted RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 PLTPP55058 493 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 KLHDC7AQ5VTJ3 777 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 OTUD6AQ7L8S5 288 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 CPLX4Q7Z7G2 160 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 VPS36Q86VN1 386 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 RNPC3Q96LT9 517 aaKnown RBP14.6□□□□□ -0.07
USP42-203ENST00000426246 FAM118BQ9BPY3 351 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 ANO3Q9BYT9 981 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 OSGEPQ9NPF4 335 aa14.6□□□□□ -0.07
USP42-203ENST00000426246 AGPSO00116 658 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 EXOC3O60645 756 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 PAK2Q13177 524 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 CENPPQ6IPU0 288 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 MKL1Q969V6 931 aa14.59□□□□□ -0.07
USP42-203ENST00000426246 PAIP2Q9BPZ3 127 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms