RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 EPSTI1Q96J88 318 aa26.88■■□□□ 1.89
APOE-202ENST00000425718 CEP170P1Q96L14 293 aa26.88■■□□□ 1.89
APOE-202ENST00000425718 CUEDC2Q9H467 287 aa26.88■■□□□ 1.89
APOE-202ENST00000425718 GDPD2Q9HCC8 539 aa26.88■■□□□ 1.89
APOE-202ENST00000425718 CYP26B1Q9NR63 512 aa26.88■■□□□ 1.89
APOE-202ENST00000425718 EYA4O95677 639 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 ATN1P54259 1190 aaPredicted RBP26.87■■□□□ 1.89
APOE-202ENST00000425718 TBC1D8BQ0IIM8 1120 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 SPECC1Q5M775 1068 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 TAF2Q6P1X5 1199 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 SHC4Q6S5L8 630 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 ANO5Q75V66 913 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 ZNF710Q8N1W2 664 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 CCDC155Q8N6L0 562 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 LMBR1Q8WVP7 490 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 CCDC34Q96HJ3 373 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 WRAP73Q9P2S5 460 aaPredicted RBP26.87■■□□□ 1.89
APOE-202ENST00000425718 USP25Q9UHP3 1055 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 TUBE1Q9UJT0 475 aa26.87■■□□□ 1.89
APOE-202ENST00000425718 ARHGEF35A5YM69 484 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 STBD1O95210 358 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 TMOD1P28289 359 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 RTP1P59025 263 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 GRB10Q13322 594 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 KARSQ15046 597 aaKnown RBP26.86■■□□□ 1.89
APOE-202ENST00000425718 TARBP2Q15633 366 aaKnown RBP26.86■■□□□ 1.89
APOE-202ENST00000425718 PTGISQ16647 500 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 MTERF2Q49AM1 385 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 IQUBQ8NA54 791 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 SLC7A3Q8WY07 619 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 MRPS27Q92552 414 aaKnown RBP26.86■■□□□ 1.89
APOE-202ENST00000425718 CHAMP1Q96JM3 812 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 MAGEF1Q9HAY2 307 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 SETD4Q9NVD3 440 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 KCND2Q9NZV8 630 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 MYH11P35749 1972 aa26.86■■□□□ 1.89
APOE-202ENST00000425718 MBLAC1A4D2B0 266 aaPredicted RBP26.85■■□□□ 1.89
APOE-202ENST00000425718 DGAT1O75907 488 aa26.85■■□□□ 1.89
APOE-202ENST00000425718 RARRES1P49788 294 aa26.85■■□□□ 1.89
APOE-202ENST00000425718 TRMT1LQ7Z2T5 733 aaKnown RBP26.85■■□□□ 1.89
APOE-202ENST00000425718 RSPH3Q86UC2 560 aa26.85■■□□□ 1.89
APOE-202ENST00000425718 FAM126BQ8IXS8 530 aa26.85■■□□□ 1.89
APOE-202ENST00000425718 PNMA5Q96PV4 448 aa26.85■■□□□ 1.89
APOE-202ENST00000425718 PLCG1P19174 1290 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 STAT6P42226 847 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 DNM2P50570 870 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 POLGP54098 1239 aaPredicted RBP26.84■■□□□ 1.89
APOE-202ENST00000425718 IGBP1P78318 339 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 ADAM17P78536 824 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 PTK7Q13308 1070 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 GDF6Q6KF10 455 aaPredicted RBP26.84■■□□□ 1.89
APOE-202ENST00000425718 PIGOQ8TEQ8 1089 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 TIPINQ9BVW5 301 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 LRRC27Q9C0I9 530 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 KCNH3Q9ULD8 1083 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 PCDHA2Q9Y5H9 948 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 ALPK3Q96L96 1907 aa26.84■■□□□ 1.89
APOE-202ENST00000425718 FAM237AA0A1B0GTK4 181 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 PQBP1O60828 265 aaKnown RBP26.83■■□□□ 1.89
APOE-202ENST00000425718 CAND2O75155 1236 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 CDC42EP1Q00587 391 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 ECM1Q16610 540 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 TRIM60Q495X7 471 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 MTHFD1LQ6UB35 978 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 USP49Q70CQ1 688 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 MCPH1Q8NEM0 835 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 TCP11Q8WWU5 503 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 LARP4BQ92615 738 aaKnown RBP26.83■■□□□ 1.89
APOE-202ENST00000425718 BHMT2Q9H2M3 363 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 ATP11BQ9Y2G3 1177 aa26.83■■□□□ 1.89
APOE-202ENST00000425718 SMIM35A0A1B0GVV1 85 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 ZBTB42B2RXF5 422 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 MAFO75444 373 aaPredicted RBP26.82■■□□□ 1.88
APOE-202ENST00000425718 CD4P01730 458 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 KLRC1P26715 233 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 UBE2HP62256 183 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 BFSP2Q13515 415 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 LRRC26Q2I0M4 334 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 PLA2G4FQ68DD2 849 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 NME8Q8N427 588 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 SYT2Q8N9I0 419 aaPredicted RBP26.82■■□□□ 1.88
APOE-202ENST00000425718 FSIP1Q8NA03 581 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 CAGE1Q8TC20 777 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 RAD54LQ92698 747 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 DHX33Q9H6R0 707 aaKnown RBP26.82■■□□□ 1.88
APOE-202ENST00000425718 ATP6V0A4Q9HBG4 840 aa26.82■■□□□ 1.88
APOE-202ENST00000425718 B4GALT4O60513 344 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 C22orf31O95567 290 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 SYKP43405 635 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 AMPD3Q01432 767 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 TLE2Q04725 743 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 RPAINQ86UA6 219 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 SERINC5Q86VE9 423 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 MAP7D2Q96T17 732 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 MTRQ99707 1265 aa26.81■■□□□ 1.88
APOE-202ENST00000425718 E9PMD0 336 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 TREHO43280 583 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 CLTBP09497 229 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 PLA2G4BP0C869 781 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 CYP2C9P11712 490 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms