RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 C8orf74Q6P047 294 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 CCDC174Q6PII3 467 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 SCFD1Q8WVM8 642 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 ARHGEF10LQ9HCE6 1279 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 A0A087X0T9 212 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 FAM228BP0C875 321 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CASP5P51878 434 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 KIAA0753Q2KHM9 967 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 GMCL1Q96IK5 515 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 NOX5Q96PH1 765 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CAPS2Q9BXY5 557 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 BHMT2Q9H2M3 363 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 ARFGEF1Q9Y6D6 1849 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 KLHL33A6NCF5 533 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 ZNF233A6NK53 670 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 NEBLO76041 1014 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CYP3A7P24462 503 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 ATP1A2P50993 1020 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 STAT2P52630 851 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 PDCLQ13371 301 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 KLHL7Q8IXQ5 586 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 RUFY1Q96T51 708 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 RBAK-RBAKDNI3L0D1 243 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 EPHB4P54760 987 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 FKBP1AP62942 108 aaKnown RBP14.19□□□□□ -0.14
COL12A1-205ENST00000425443 KLHL30Q0D2K2 578 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 MOXD1Q6UVY6 613 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 SFR1Q86XK3 245 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 FAM20AQ96MK3 541 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 NUCKS1Q9H1E3 243 aaKnown RBP14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CENPHQ9H3R5 247 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 VEZTQ9HBM0 779 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 EPB41L5Q9HCM4 733 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 CEP72Q9P209 647 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
COL12A1-205ENST00000425443 C21orf2O43822 256 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 ENTPD3O75355 529 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 RPA1P27694 616 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 ECE1P42892 770 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 UBXN2AP68543 259 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 GUCY2DQ02846 1103 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 ETNPPLQ8TBG4 499 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 BCAS4Q8TDM0 211 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 SPAG5Q96R06 1193 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 PAIP2Q9BPZ3 127 aaKnown RBP14.18□□□□□ -0.14
COL12A1-205ENST00000425443 TBX3O15119 743 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 CLIC2O15247 247 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 EIF3HO15372 352 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL12A1-205ENST00000425443 GCNT3O95395 438 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 SREBF1P36956 1147 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 SLC12A3P55017 1021 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 ARSHQ5FYA8 562 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 TPH2Q8IWU9 490 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 CASKIN2Q8WXE0 1202 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 KAT2BQ92831 832 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 CAVIN3Q969G5 261 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 CCDC43Q96MW1 224 aaKnown RBP14.18□□□□□ -0.14
COL12A1-205ENST00000425443 KRT12Q99456 494 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 GDF3Q9NR23 364 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 ARMCX3Q9UH62 379 aaPredicted RBP14.18□□□□□ -0.14
COL12A1-205ENST00000425443 RABGAP1Q9Y3P9 1069 aa14.18□□□□□ -0.14
COL12A1-205ENST00000425443 MSH4O15457 936 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 HEXIM1O94992 359 aaKnown RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 INHBEP58166 350 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 KCNH2Q12809 1159 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 RINLQ6ZS11 566 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 P2RX7Q99572 595 aaKnown RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 EDEM3Q9BZQ6 932 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 PITPNM2Q9BZ72 1349 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 SSU72P8A0A1W2PR75 194 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 RSPH10B2B2RC85 870 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 RAD17O75943 681 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 ECEL1O95672 775 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 RSPH10BP0C881 870 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 SLC9A1P19634 815 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 GSCP56915 257 aaPredicted RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 GIT2Q14161 759 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 Q4G0T1 1027 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 STK24Q9Y6E0 443 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 C10orf71Q711Q0 1435 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 GRID2IPA4D2P6 1211 aa14.17□□□□□ -0.14
COL12A1-205ENST00000425443 CALUO43852 315 aaPredicted RBP14.17□□□□□ -0.14
COL12A1-205ENST00000425443 SERPING1P05155 500 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms