RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 NSMFQ6X4W1 530 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TEKT3Q9BXF9 490 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 GANQ9H2C0 597 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 GCNT4Q9P109 453 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TRAF3IP3Q9Y228 551 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 JRKLQ9Y4A0 524 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 KLRC1P26715 233 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 PON1P27169 355 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 PTK2Q05397 1052 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 MTMR2Q13614 643 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 CCDC181Q5TID7 509 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 HDAC7Q8WUI4 952 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
UBR4-207ENST00000425413 ZNF536O15090 1300 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 USP14P54578 494 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 SP4Q02446 784 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 MIER3Q7Z3K6 550 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 NOX5Q96PH1 765 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
UBR4-207ENST00000425413 MYH10P35580 1976 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 HIP1RO75146 1068 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 PALMO75781 387 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 MYBL2P10244 700 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 RPL13P26373 211 aaKnown RBP12.67□□□□□ -0.38
UBR4-207ENST00000425413 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 SLC35C1Q96A29 364 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 WNK4Q96J92 1243 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 TAAR1Q96RJ0 339 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 OSBPL9Q96SU4 736 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
UBR4-207ENST00000425413 CKAP4Q07065 602 aaKnown RBP12.67□□□□□ -0.38
UBR4-207ENST00000425413 TRAF1Q13077 416 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 KLHDC7AQ5VTJ3 777 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 ZNF571Q7Z3V5 609 aaPredicted RBP12.67□□□□□ -0.38
UBR4-207ENST00000425413 FRMD5Q7Z6J6 570 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
UBR4-207ENST00000425413 TAOK3Q9H2K8 898 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 ZMYM2Q9UBW7 1377 aa12.67□□□□□ -0.38
UBR4-207ENST00000425413 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 ICAM1P05362 532 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 PTGER2P43116 358 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 BAG6P46379 1132 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 FAM193AP78312 1265 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 SPP2Q13103 211 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 PRKG1Q13976 671 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 CASP8Q14790 479 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 HDXQ7Z353 690 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 PRPF38AQ8NAV1 312 aaKnown RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 LRRIQ3A6PVS8 624 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 GFPT2O94808 682 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 LCA5LO95447 670 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 SLC18A3Q16572 532 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 EDEM3Q9BZQ6 932 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 GPRC5CQ9NQ84 441 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 K7ENM7 598 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 GAP43P17677 238 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 EPHA7Q15375 998 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 DALRD3Q5D0E6 543 aaKnown RBP12.66□□□□□ -0.38
UBR4-207ENST00000425413 FOXR2Q6PJQ5 311 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 GBP6Q6ZN66 633 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
UBR4-207ENST00000425413 LRRC1Q9BTT6 524 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms