RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ELAC1Q9H777 363 aaKnown RBP13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 COL1A2P08123 1366 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MYH6P13533 1939 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CHD7Q9P2D1 2997 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 FGF18O76093 207 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ATG7O95352 703 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PSAPP07602 524 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 RXRAP19793 462 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PPM1AP35813 382 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SIGLEC14Q08ET2 396 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 FBXL6Q8N531 539 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 METTL13Q8N6R0 699 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NRBP2Q9NSY0 501 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TELO2Q9Y4R8 837 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB3-203ENST00000425319 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LOC730098B7Z3J9 87 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MEIS1O00470 390 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ARP10275 920 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NUBP1P53384 320 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 RTN1Q16799 776 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMEM266Q2M3C6 531 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SWSAP1Q6NVH7 229 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMC7Q7Z402 723 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PCYT2Q99447 389 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ANO3Q9BYT9 981 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 C6orf50Q9HD87 102 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TYW1Q9NV66 732 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CLEC1BQ9P126 229 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 BARX2Q9UMQ3 279 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MICAL3Q7RTP6 2002 aa13.93□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SLC27A2O14975 620 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PER2O15055 1255 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZBTB43O43298 467 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ST18O60284 1047 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DNAJB1P25685 340 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PDE4AP27815 886 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 GNA11P29992 359 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CA8P35219 290 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TECP42680 631 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SETQ01105 290 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CAMK1Q14012 370 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 KRT32Q14532 448 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CREB3L3Q68CJ9 461 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ADGRD2Q7Z7M1 963 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 COLGALT1Q8NBJ5 622 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 RSPH1Q8WYR4 309 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MRPS27Q92552 414 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CASP10Q92851 521 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ERVK-5Q9HDB9 667 aa13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NOC2LQ9Y3T9 749 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB3-203ENST00000425319 IPO5O00410 1097 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SREBF1P36956 1147 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DUSP6Q16828 381 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 KIAA0319LQ8IZA0 1049 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NECTIN4Q96NY8 510 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SPG21Q9NZD8 308 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 AKT3Q9Y243 479 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 PCDHA10Q9Y5I2 948 aa13.91□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LAMA4Q16363 1823 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms