RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PADI3Q9ULW8 664 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 TCF20Q9UGU0 1960 aaKnown RBP17.18■□□□□ 0.34
USB1-202ENST00000423271 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 WDR64B1ANS9 1081 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 CHMP2AO43633 222 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 PFKFB2O60825 505 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 AK2P54819 239 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 PAK2Q13177 524 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 UGCGQ16739 394 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 TMEM266Q2M3C6 531 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 RALGAPA2Q2PPJ7 1873 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 LRCH2Q5VUJ6 765 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
USB1-202ENST00000423271 NME8Q8N427 588 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 BBXQ8WY36 941 aaPredicted RBP17.17■□□□□ 0.34
USB1-202ENST00000423271 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 UNC45AQ9H3U1 944 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 CDHR5Q9HBB8 845 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 DISC1Q9NRI5 854 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 GJB4Q9NTQ9 266 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 GINS2Q9Y248 185 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 SQORQ9Y6N5 450 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 ADGRA3Q8IWK6 1321 aa17.17■□□□□ 0.34
USB1-202ENST00000423271 MYO7AQ13402 2215 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 ZNF862O60290 1169 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 GAS7O60861 476 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 CDKL5O76039 1030 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 KCNQ1P51787 676 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 Q4G0T1 1027 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 TMEM192Q8IY95 271 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 ADAMTS19Q8TE59 1207 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 SAMD11Q96NU1 681 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 RIT2Q99578 217 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 TEKT3Q9BXF9 490 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
USB1-202ENST00000423271 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 PSMD10O75832 226 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 LARGE1O95461 756 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 VTNP04004 478 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 CYP3A7P24462 503 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 PRKCEQ02156 737 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-202ENST00000423271 INF2Q27J81 1249 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 METTL13Q8N6R0 699 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 MBOAT7Q96N66 472 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
USB1-202ENST00000423271 NOC2LQ9Y3T9 749 aaKnown RBP17.15■□□□□ 0.34
USB1-202ENST00000423271 ATG2AQ2TAZ0 1938 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 H3BNC9 293 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 SLC37A4O43826 429 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 MGEA5O60502 916 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 OATP04181 439 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.33
USB1-202ENST00000423271 CTNNB1P35222 781 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 CLCN3P51790 818 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 NFX1Q12986 1120 aaKnown RBP17.14■□□□□ 0.33
USB1-202ENST00000423271 GPM6BQ13491 265 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
USB1-202ENST00000423271 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 NECAB1Q8N987 351 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 HLA-CQ95604 372 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 ZNF689Q96CS4 500 aaPredicted RBP17.14■□□□□ 0.33
USB1-202ENST00000423271 FAM167AQ96KS9 214 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
USB1-202ENST00000423271 OSMRQ99650 979 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 COG5Q9UP83 839 aa17.14■□□□□ 0.33
USB1-202ENST00000423271 BDP1A6H8Y1 2624 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 DGKIO75912 1065 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 BMP1P13497 986 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 GATMP50440 423 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 JAK3P52333 1124 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
USB1-202ENST00000423271 ME3Q16798 604 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 MOXD1Q6UVY6 613 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 B3GNT9Q6UX72 402 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 MIER3Q7Z3K6 550 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 LRRC71Q8N4P6 559 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 LINC01465Q8N7H1 131 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 MRPL38Q96DV4 380 aaKnown RBP17.13■□□□□ 0.33
USB1-202ENST00000423271 UHRF1Q96T88 793 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms