RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 CRYBB1P53674 252 aaPredicted RBP9.74□□□□□ -0.85
MDC1-204ENST00000422266 TBC1D8BQ0IIM8 1120 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 SAFBQ15424 915 aaKnown RBP eCLIP9.74□□□□□ -0.85
MDC1-204ENST00000422266 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 NAALADL2Q58DX5 795 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 NPAS4Q8IUM7 802 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 METTL13Q8N6R0 699 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 RSPH1Q8WYR4 309 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 GTF3C6Q969F1 213 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 ZSCAN31Q96LW9 406 aaPredicted RBP9.74□□□□□ -0.85
MDC1-204ENST00000422266 MBOAT7Q96N66 472 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
MDC1-204ENST00000422266 C11orf84Q9BUA3 381 aaPredicted RBP9.74□□□□□ -0.85
MDC1-204ENST00000422266 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 CERS4Q9HA82 394 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 UPF2Q9HAU5 1272 aaKnown RBP9.74□□□□□ -0.85
MDC1-204ENST00000422266 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 GBF1Q92538 1859 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
MDC1-204ENST00000422266 DENND3A2RUS2 1198 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 LCHNA4D1U4 455 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 NCK2O43639 380 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 CCNT1O60563 726 aaKnown RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 C22orf31O95567 290 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 CD52P31358 61 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 PSMC5P62195 406 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 PRKCEQ02156 737 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 GRB10Q13322 594 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 PPP2R5CQ13362 524 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 INF2Q27J81 1249 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 TIGD5Q53EQ6 642 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 KIAA0319LQ8IZA0 1049 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 ETNPPLQ8TBG4 499 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 PPP2R3CQ969Q6 453 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 ASB2Q96Q27 587 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 INO80BQ9C086 356 aaPredicted RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 SH2B1Q9NRF2 756 aaPredicted RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 LRFN2Q9ULH4 789 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 LIMCH1Q9UPQ0 1083 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 AKT3Q9Y243 479 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 PCDHB7Q9Y5E2 793 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 MYH9P35579 1960 aaKnown RBP9.73□□□□□ -0.85
MDC1-204ENST00000422266 ADGRA3Q8IWK6 1321 aa9.73□□□□□ -0.85
MDC1-204ENST00000422266 C5orf67F2Z3F1 127 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 H3BNC9 293 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 HOXA2O43364 376 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 CHMP2AO43633 222 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 GAS2O43903 313 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 P4HBP07237 508 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 ATP4AP20648 1035 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 BTG3Q14201 252 aaPredicted RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 NPY5RQ15761 445 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 ME3Q16798 604 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 TCTN1Q2MV58 587 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 EPC2Q52LR7 807 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 EFCAB12Q6NXP0 572 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 SLC24A5Q71RS6 500 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 OTUD6AQ7L8S5 288 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 TMCO2Q7Z6W1 182 aaPredicted RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 TMEM192Q8IY95 271 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 CMTR2Q8IYT2 770 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 TRAPPC12Q8WVT3 735 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 HLA-CQ95604 372 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 MRPL38Q96DV4 380 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 NIFKQ9BYG3 293 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 UNC45AQ9H3U1 944 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 AGO3Q9H9G7 860 aaKnown RBP9.72□□□□□ -0.85
MDC1-204ENST00000422266 KCNMB3Q9NPA1 279 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 AAASQ9NRG9 546 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 GINS2Q9Y248 185 aa9.72□□□□□ -0.85
MDC1-204ENST00000422266 FSD2A1L4K1 749 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 ZBTB42B2RXF5 422 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 DGKIO75912 1065 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 TDP2O95551 362 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 MMP1P03956 469 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 EIF4BP23588 611 aaKnown RBP9.71□□□□□ -0.86
MDC1-204ENST00000422266 BMPR1AP36894 532 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
MDC1-204ENST00000422266 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
MDC1-204ENST00000422266 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms