RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RETP07949 1114 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 CT47B1P0C2W7 299 aaPredicted RBP13.89□□□□□ -0.19
UFD1-203ENST00000421968 TGFB3P10600 412 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 TRIM27P14373 513 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 PDE4AP27815 886 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 PBX3P40426 434 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 BMS1Q14692 1282 aaKnown RBP13.89□□□□□ -0.19
UFD1-203ENST00000421968 TSSK4Q6SA08 328 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 RHPN1Q8TCX5 695 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 NELL1Q92832 810 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 GLG1Q92896 1179 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 SHDQ96IW2 340 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 BCAS3Q9H6U6 928 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 SFXN1Q9H9B4 322 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 SPG21Q9NZD8 308 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
UFD1-203ENST00000421968 TMEM8BA6NDV4 472 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 N4BP1O75113 896 aaKnown RBP13.88□□□□□ -0.19
UFD1-203ENST00000421968 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
UFD1-203ENST00000421968 STARD6P59095 220 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 CSRP2Q16527 193 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 IER5Q5VY09 327 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.193e-7■■□□□ 12.2
UFD1-203ENST00000421968 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 ABCB11O95342 1321 aa13.88□□□□□ -0.19
UFD1-203ENST00000421968 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 M0QZ92 97 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 FGFR1P11362 822 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 GNAT2P19087 354 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 SOWAHCQ53LP3 525 aaPredicted RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 IFNL3Q8IZI9 196 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 NXPE3Q969Y0 559 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 KIF12Q96FN5 646 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 FAM49AQ9H0Q0 323 aaPredicted RBP13.87□□□□□ -0.19
UFD1-203ENST00000421968 BPTFQ12830 3046 aa13.87□□□□□ -0.19
UFD1-203ENST00000421968 KANSL1LA0AUZ9 987 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 GPAA1O43292 621 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 ATP5JP18859 108 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 PPARAQ07869 468 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 UBXN2BQ14CS0 331 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 TMEM266Q2M3C6 531 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 PRR23BQ6ZRT6 265 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 SLC22A17Q8WUG5 538 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 OSBP2Q969R2 916 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
UFD1-203ENST00000421968 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 SLC2A4RGQ9NR83 387 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 IGSF10Q6WRI0 2623 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 IGSF9BQ9UPX0 1349 aa13.86□□□□□ -0.19
UFD1-203ENST00000421968 ITPR1Q14643 2758 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 DENND3A2RUS2 1198 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 FAM170BA6NMN3 283 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 PATL2C9JE40 543 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 MGEA5O60502 916 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 FOXD2O60548 495 aaPredicted RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 CFBP00751 764 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 PDHBP11177 359 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 TOP1P11387 765 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 NOVP48745 357 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 GRIK4Q16099 956 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 HSP90AB4PQ58FF6 505 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 METTL7BQ6UX53 244 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 CYFIP1Q7L576 1253 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 VSIG10LQ86VR7 867 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 CELF5Q8N6W0 485 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 AUTS2Q8WXX7 1259 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 ZCCHC14Q8WYQ9 949 aaKnown RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 ADAM2Q99965 735 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 EPS15L1Q9UBC2 864 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 MTF2Q9Y483 593 aaPredicted RBP13.85□□□□□ -0.19
UFD1-203ENST00000421968 DOCK8Q8NF50 2099 aa13.85□□□□□ -0.19
UFD1-203ENST00000421968 DOCK5Q9H7D0 1870 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
UFD1-203ENST00000421968 CYSRT1A8MQ03 144 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 TM4SF5O14894 197 aa13.84□□□□□ -0.19
UFD1-203ENST00000421968 RPLP2P05387 115 aaKnown RBP13.84□□□□□ -0.19
UFD1-203ENST00000421968 MAGEA9P43362 315 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms