RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 CBX8Q9HC52 389 aa19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 SRRDQ9UH36 339 aa19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 TELO2Q9Y4R8 837 aa19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 MAFBQ9Y5Q3 323 aaPredicted RBP19.01■□□□□ 0.63
CCDC28B-202ENST00000421922 IGKV6D-21A0A0A0MT36 114 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 SMTNL1A8MU46 457 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 GAP43P17677 238 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 CACNB1Q02641 598 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 BRDTQ58F21 947 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 HERC4Q5GLZ8 1057 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 CT47A1Q5JQC4 288 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 GJC2Q5T442 439 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 PLA2G4FQ68DD2 849 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 RAET1EQ8TD07 263 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 DNAJC19Q96DA6 116 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 BPIFA3Q9BQP9 254 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 TIPINQ9BVW5 301 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 AP5M1Q9H0R1 490 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ZNF862O60290 1169 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 LGR5O75473 907 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ZNF865P0CJ78 1059 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 AKR1A1P14550 325 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 SLC26A2P50443 739 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 GIT2Q14161 759 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ARSHQ5FYA8 562 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 FAM26FQ5R3K3 315 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 KLHL10Q6JEL2 608 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 C1orf186Q6ZWK4 172 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 PLPPR4Q7Z2D5 763 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 AFG1LQ8WV93 481 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 ZNF215Q9UL58 517 aaPredicted RBP19■□□□□ 0.63
CCDC28B-202ENST00000421922 GDAQ9Y2T3 454 aa19■□□□□ 0.63
CCDC28B-202ENST00000421922 PSMA7O14818 248 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 KIF20AO95235 890 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 BMP6P22004 513 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 GUCY2CP25092 1073 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 CNGA1P29973 690 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 UVSSAQ2YD98 709 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 MTERF2Q49AM1 385 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 TMEM63BQ5T3F8 832 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 ANO5Q75V66 913 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 TLK2Q86UE8 772 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 SMYD4Q8IYR2 804 aaPredicted RBP18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 TRIB2Q92519 343 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 DRC1Q96MC2 740 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 PARVGQ9HBI0 331 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 CYP26B1Q9NR63 512 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 CTNND2Q9UQB3 1225 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 TRPC6Q9Y210 931 aa18.99■□□□□ 0.63
CCDC28B-202ENST00000421922 SYNRGQ9UMZ2 1314 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 TMEM150BA6NC51 233 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 DYNC1LI2O43237 492 aaPredicted RBP18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 MARK3P27448 753 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 POLGP54098 1239 aaPredicted RBP18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 NPEPPSP55786 919 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 MYL5Q02045 173 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 DGKDQ16760 1214 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 TPD52L1Q16890 204 aaPredicted RBP18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 LUZP1Q86V48 1076 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 MYCT1Q8N699 235 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 ATP6V0A4Q9HBG4 840 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 SLC39A2Q9NP94 309 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 ERAP1Q9NZ08 941 aa18.98■□□□□ 0.63
CCDC28B-202ENST00000421922 FRMD3A2A2Y4 597 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 ADCY3O60266 1144 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 HIP1RO75146 1068 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 DGAT1O75907 488 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 LGALS2P05162 132 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 CPT1AP50416 773 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 PRMT2P55345 433 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 PAK1Q13153 545 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 STXBP4Q6ZWJ1 553 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 MAEAQ7L5Y9 396 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 SFR1Q86XK3 245 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 TRIM50Q86XT4 487 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 MCPH1Q8NEM0 835 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 BBXQ8WY36 941 aaPredicted RBP18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 PCYT2Q99447 389 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 SH2D3AQ9BRG2 576 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 SEL1LQ9UBV2 794 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 Q9Y3F1 56 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 PPME1Q9Y570 386 aa18.97■□□□□ 0.63
CCDC28B-202ENST00000421922 PPFIA4O75335 1185 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 HMGCRP04035 888 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 MMP3P08254 477 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 CYBAP13498 195 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 FAM102BQ5T8I3 360 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 EXOC8Q8IYI6 725 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 SLC7A3Q8WY07 619 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 MRPL44Q9H9J2 332 aaKnown RBP18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 SPC25Q9HBM1 224 aa18.96■□□□□ 0.63
CCDC28B-202ENST00000421922 TBC1D7Q9P0N9 293 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms