RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
SFXN1-202ENST00000421887 TGM1P22735 817 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 ZNF165P49910 485 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 GRM1Q13255 1194 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 SURF1Q15526 300 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
SFXN1-202ENST00000421887 TRAIPQ9BWF2 469 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 CD248Q9HCU0 757 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 MRS2Q9HD23 443 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 KCNQ5Q9NR82 932 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 GULP1Q9UBP9 304 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 CASP8AP2Q9UKL3 1982 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 PASKQ96RG2 1323 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 DLEC1Q9Y238 1755 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 COL5A3P25940 1745 aaPredicted RBP6.74□□□□□ -1.33
SFXN1-202ENST00000421887 RASSF10A6NK89 507 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 MEIS3P2A8K0S8 358 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 B4GALT3O60512 393 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 ECE1P42892 770 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 CD300LDQ6UXZ3 194 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
SFXN1-202ENST00000421887 ZNF341Q9BYN7 854 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 SLC12A5Q9H2X9 1139 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 JADE2Q9NQC1 790 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 C11orf21Q9P2W6 132 aa6.74□□□□□ -1.33
SFXN1-202ENST00000421887 ROCK2O75116 1388 aaKnown RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 H0YIN7 160 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 GPR42O15529 346 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 PPP1R11O60927 126 aaPredicted RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 DDNO94850 711 aaPredicted RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 CD247P20963 164 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 PMS1P54277 932 aaKnown RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 KCNA1Q09470 495 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 RRS1Q15050 365 aaKnown RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 AXDND1Q5T1B0 1012 aaPredicted RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 ETV3LQ6ZN32 361 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 FAM26EQ8N5C1 309 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 ZNF831Q5JPB2 1677 aa6.73□□□□□ -1.33
SFXN1-202ENST00000421887 AFDNP55196 1824 aaKnown RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 MYH14Q7Z406 1995 aaKnown RBP6.73□□□□□ -1.33
SFXN1-202ENST00000421887 A0A1W2PP64 1363 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 POLRMTO00411 1230 aaKnown RBP6.72□□□□□ -1.33
SFXN1-202ENST00000421887 CA12O43570 354 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 CYP1A1P04798 512 aaPredicted RBP6.72□□□□□ -1.33
SFXN1-202ENST00000421887 ACRP10323 421 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 DDR1Q08345 913 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 FHL2Q14192 279 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 ANKRD39Q53RE8 183 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 SPDYAQ5MJ70 313 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 ERMP1Q7Z2K6 904 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 PLEKHH3Q7Z736 793 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 PNMA8AQ86V59 439 aaPredicted RBP6.72□□□□□ -1.33
SFXN1-202ENST00000421887 PPFIBP1Q86W92 1011 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 CPNE8Q86YQ8 564 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 C2CD5Q86YS7 1000 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 GPR101Q96P66 508 aaPredicted RBP6.72□□□□□ -1.33
SFXN1-202ENST00000421887 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 TCAF1Q9Y4C2 921 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 ZNF451Q9Y4E5 1061 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 FER1L6Q2WGJ9 1857 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
SFXN1-202ENST00000421887 LTBP3Q9NS15 1303 aa6.72□□□□□ -1.33
SFXN1-202ENST00000421887 CACNA1SQ13698 1873 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 NTRK1P04629 796 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 ITGA4P13612 1032 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 EEF1DP3Q658K8 133 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 CNTROBQ8N137 903 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 IGDCC4Q8TDY8 1250 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 ZNF622Q969S3 477 aaKnown RBP eCLIP6.71□□□□□ -1.34
SFXN1-202ENST00000421887 CAPNS2Q96L46 248 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 MTA3Q9BTC8 594 aa6.71□□□□□ -1.34
SFXN1-202ENST00000421887 TAF1DQ9H5J8 278 aaPredicted RBP6.71□□□□□ -1.34
SFXN1-202ENST00000421887 SRP68Q9UHB9 627 aaKnown RBP6.71□□□□□ -1.34
SFXN1-202ENST00000421887 INSRP06213 1382 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 FLT4P35916 1363 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 MUSKO15146 869 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 CRKLP46109 303 aaKnown RBP6.7□□□□□ -1.34
SFXN1-202ENST00000421887 HSP90AB2PQ58FF8 381 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 PRAMEF18Q5VWM3 479 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 INTS3Q68E01 1043 aaKnown RBP6.7□□□□□ -1.34
SFXN1-202ENST00000421887 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 HACL1Q9UJ83 578 aa6.7□□□□□ -1.34
SFXN1-202ENST00000421887 KDRP35968 1356 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 TRPM7Q96QT4 1865 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 STXBP3O00186 592 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 NPHP1O15259 732 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 FUCA1P04066 466 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
SFXN1-202ENST00000421887 PHKG2P15735 406 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 TM4SF1P30408 202 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 EPHX2P34913 555 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 MAP2K2P36507 400 aa6.69□□□□□ -1.34
SFXN1-202ENST00000421887 ITGA1P56199 1179 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms