RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 POLR3CQ9BUI4 534 aaPredicted RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 A0A087X0T9 212 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 CYP3A4P08684 503 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 FAM228BP0C875 321 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 TRIM49P0CI25 452 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 TRIM49CP0CI26 452 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 ALS2CR12Q96Q35 445 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 NACC1Q96RE7 527 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 TISP43B9A030 160 aa12□□□□□ -0.49
DDX56-203ENST00000421223 ERLIN1O75477 346 aa12□□□□□ -0.49
DDX56-203ENST00000421223 GMPSP49915 693 aaPredicted RBP12□□□□□ -0.49
DDX56-203ENST00000421223 FAM193AP78312 1265 aa12□□□□□ -0.49
DDX56-203ENST00000421223 SMC1AQ14683 1233 aaKnown RBP12□□□□□ -0.49
DDX56-203ENST00000421223 TERF2Q15554 542 aa12□□□□□ -0.49
DDX56-203ENST00000421223 HS2ST1Q7LGA3 356 aa12□□□□□ -0.49
DDX56-203ENST00000421223 TRIM58Q8NG06 486 aa12□□□□□ -0.49
DDX56-203ENST00000421223 TSGA10Q9BZW7 698 aa12□□□□□ -0.49
DDX56-203ENST00000421223 DEFB129Q9H1M3 183 aa12□□□□□ -0.49
DDX56-203ENST00000421223 TYW1Q9NV66 732 aaKnown RBP12□□□□□ -0.49
DDX56-203ENST00000421223 GCNT4Q9P109 453 aa12□□□□□ -0.49
DDX56-203ENST00000421223 COL4A5P29400 1685 aa12□□□□□ -0.49
DDX56-203ENST00000421223 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
DDX56-203ENST00000421223 MAPK8IP2Q13387 824 aaPredicted RBP12□□□□□ -0.49
DDX56-203ENST00000421223 TNIP1Q15025 636 aa12□□□□□ -0.49
DDX56-203ENST00000421223 EDRF1Q3B7T1 1238 aa12□□□□□ -0.49
DDX56-203ENST00000421223 HGSNATQ68CP4 663 aa12□□□□□ -0.49
DDX56-203ENST00000421223 FAM83AQ86UY5 434 aa12□□□□□ -0.49
DDX56-203ENST00000421223 FAM186BQ8IYM0 893 aa12□□□□□ -0.49
DDX56-203ENST00000421223 SLC5A5Q92911 643 aa12□□□□□ -0.49
DDX56-203ENST00000421223 CCDC102AQ96A19 550 aa12□□□□□ -0.49
DDX56-203ENST00000421223 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
DDX56-203ENST00000421223 CNOT7Q9UIV1 285 aaKnown RBP12□□□□□ -0.49
DDX56-203ENST00000421223 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
DDX56-203ENST00000421223 QSER1Q2KHR3 1735 aa12□□□□□ -0.49
DDX56-203ENST00000421223 ASTN1O14525 1302 aa12□□□□□ -0.49
DDX56-203ENST00000421223 FRMD3A2A2Y4 597 aa12□□□□□ -0.49
DDX56-203ENST00000421223 CCDC151A5D8V7 595 aa12□□□□□ -0.49
DDX56-203ENST00000421223 PDXKO00764 312 aa12□□□□□ -0.49
DDX56-203ENST00000421223 EXOC3O60645 756 aa12□□□□□ -0.49
DDX56-203ENST00000421223 HIP1RO75146 1068 aa12□□□□□ -0.49
DDX56-203ENST00000421223 SERPING1P05155 500 aa12□□□□□ -0.49
DDX56-203ENST00000421223 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
DDX56-203ENST00000421223 SLC7A5Q01650 507 aa12□□□□□ -0.49
DDX56-203ENST00000421223 TUBB2AQ13885 445 aa12□□□□□ -0.49
DDX56-203ENST00000421223 ARHGAP44Q17R89 818 aa12□□□□□ -0.49
DDX56-203ENST00000421223 C1orf186Q6ZWK4 172 aa12□□□□□ -0.49
DDX56-203ENST00000421223 WNK4Q96J92 1243 aa12□□□□□ -0.49
DDX56-203ENST00000421223 MS4A14Q96JA4 679 aa12□□□□□ -0.49
DDX56-203ENST00000421223 TUBB2BQ9BVA1 445 aa12□□□□□ -0.49
DDX56-203ENST00000421223 RPAP3Q9H6T3 665 aaPredicted RBP12□□□□□ -0.49
DDX56-203ENST00000421223 HACL1Q9UJ83 578 aa12□□□□□ -0.49
DDX56-203ENST00000421223 MYH10P35580 1976 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 K7ENM7 598 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 TGFB1I1O43294 461 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 ICAM1P05362 532 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 UCHL3P15374 230 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 PADI6Q6TGC4 694 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 PPP4R3CPQ6ZMV5 832 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 NOX5Q96PH1 765 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 FUT8Q9BYC5 575 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 PDE11AQ9HCR9 933 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
DDX56-203ENST00000421223 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
DDX56-203ENST00000421223 GFPT2O94808 682 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 KLRC1P26715 233 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 PON1P27169 355 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 CDK17Q00537 523 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 PTK2Q05397 1052 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 MTMR1Q13613 665 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 BRD3Q15059 726 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 GBP6Q6ZN66 633 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 ATG4CQ96DT6 458 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 IQCDQ96DY2 449 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 RMDN3Q96TC7 470 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 GPRC5CQ9NQ84 441 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 JRKLQ9Y4A0 524 aa11.99□□□□□ -0.49
DDX56-203ENST00000421223 HNRNPH3P31942 346 aaKnown RBP11.98□□□□□ -0.49
DDX56-203ENST00000421223 USP8P40818 1118 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 DLK2Q6UY11 383 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 TRERF1Q96PN7 1200 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 TRAF3IP3Q9Y228 551 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 ZNF536O15090 1300 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 ARFGEF1Q9Y6D6 1849 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 PALMO75781 387 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 VCAM1P19320 739 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 HMGCS2P54868 508 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 NPEPPSP55786 919 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 PPP2R5CQ13362 524 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 TNFAIP1Q13829 316 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 EPHA7Q15375 998 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 ARHGEF16Q5VV41 709 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 PAPD7Q5XG87 772 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms