RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 VAV3Q9UKW4 847 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 REV3LO60673 3130 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 RSPH10B2B2RC85 870 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 RSPH10BP0C881 870 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 ATP4AP20648 1035 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 TFF2Q03403 129 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 MCTP1Q6DN14 999 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
ECHDC3-202ENST00000420401 COL1A2P08123 1366 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 KIF28PB7ZC32 967 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 GTPBP6O43824 516 aaPredicted RBP20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 ACTN1P12814 892 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 MYOGP15173 224 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 ATP2A2P16615 1042 aaKnown RBP20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 MCM7P33993 719 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 RPAINQ86UA6 219 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 INTS4Q96HW7 963 aaKnown RBP20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 PRRC2BQ5JSZ5 2229 aaKnown RBP20.46■□□□□ 0.87
ECHDC3-202ENST00000420401 OATP04181 439 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 PDCP20941 246 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 KCNQ1P51787 676 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 ZNF174Q15697 407 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 TTC38Q5R3I4 469 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 MTHFD1LQ6UB35 978 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 RUFY4Q6ZNE9 571 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 TRAPPC12Q8WVT3 735 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 TRANK1O15050 2925 aa20.45■□□□□ 0.86
ECHDC3-202ENST00000420401 SCN5AQ14524 2016 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 EML1O00423 815 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 WNT7AO00755 349 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 DKC1O60832 514 aaKnown RBP eCLIP20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 TXKP42681 527 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 PSMC5P62195 406 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 PRKCEQ02156 737 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 EPHA7Q15375 998 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 NCAPH2Q6IBW4 605 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 TRAF7Q6Q0C0 670 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 TTC12Q9H892 705 aaPredicted RBP20.44■□□□□ 0.86
ECHDC3-202ENST00000420401 ZNF862O60290 1169 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 CXCL10P02778 98 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 P4HBP07237 508 aaKnown RBP20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 KLRC1P26715 233 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 QARSP47897 775 aaKnown RBP20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 UGCGQ16739 394 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 XKR3Q5GH77 459 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 FAM26DQ5JW98 314 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 NME8Q8N427 588 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 DNAJB3Q8WWF6 145 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 VWCEQ96DN2 955 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 XIRP2A4UGR9 3374 aa20.43■□□□□ 0.86
ECHDC3-202ENST00000420401 SMIM35A0A1B0GVV1 85 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 ZBTB42B2RXF5 422 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 MAGEB2O15479 319 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 NBNO60934 754 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 CTSHP09668 335 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 SPIRE1Q08AE8 756 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 GPNMBQ14956 572 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 IER5Q5VY09 327 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 BANK1Q8NDB2 785 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 ZBTB10Q96DT7 871 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 FAM49AQ9H0Q0 323 aaPredicted RBP20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 TMEM60Q9H2L4 133 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 CERS4Q9HA82 394 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 HCN4Q9Y3Q4 1203 aa20.42■□□□□ 0.86
ECHDC3-202ENST00000420401 TRIP12Q14669 1992 aaPredicted RBP20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 KAT6AQ92794 2004 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 M0QZ92 97 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 RFXAPO00287 272 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 CA3P07451 260 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 OR52Z1P0C646 297 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 MBTPS1Q14703 1052 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 RILPL1Q5EBL4 403 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 CNKSR3Q6P9H4 555 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 NIFKQ9BYG3 293 aaKnown RBP20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 SEPT9Q9UHD8 586 aaPredicted RBP20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 COG5Q9UP83 839 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
ECHDC3-202ENST00000420401 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 C22orf31O95567 290 aa20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 TOB1P50616 345 aaPredicted RBP20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 MRPS6P82932 125 aaKnown RBP20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 METTL13Q8N6R0 699 aa20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 ZSWIM4Q9H7M6 989 aa20.4■□□□□ 0.86
ECHDC3-202ENST00000420401 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.86
ECHDC3-202ENST00000420401 CHRNA1P02708 482 aa20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 POU3F3P20264 500 aaPredicted RBP20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 TMOD1P28289 359 aa20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 HOXD11P31277 338 aaPredicted RBP20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 IKBKEQ14164 716 aa20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 NEK9Q8TD19 979 aa20.39■□□□□ 0.85
ECHDC3-202ENST00000420401 SEPT8Q92599 483 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms