RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 HAUS3Q68CZ6 603 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 PLA2G4FQ68DD2 849 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 TRAF7Q6Q0C0 670 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 LRRC8DQ7L1W4 858 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 SCLYQ96I15 445 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 TET1Q8NFU7 2136 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 SMIM35A0A1B0GVV1 85 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 MAGEB2O15479 319 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 YWHABP31946 246 aaKnown RBP23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 CEBPZQ03701 1054 aaKnown RBP23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 PPIGQ13427 754 aaKnown RBP eCLIP23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 CHRDL2Q6WN34 429 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 RSPH3Q86UC2 560 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 CATSPER3Q86XQ3 398 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 DNAJB3Q8WWF6 145 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 ZNF396Q96N95 335 aaPredicted RBP23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 CEP89Q96ST8 783 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 FAM49AQ9H0Q0 323 aaPredicted RBP23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 STK24Q9Y6E0 443 aa23.09■■□□□ 1.29
HMGXB4-203ENST00000420166 SIP14410 1827 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 PP2D1A8MPX8 630 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 RPLP2P05387 115 aaKnown RBP23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 BMP8BP34820 402 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 CCT6AP40227 531 aaKnown RBP23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 NASPP49321 788 aaPredicted RBP23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 NPEPPSP55786 919 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 TBC1D8BQ0IIM8 1120 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 OTUD6AQ7L8S5 288 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 SNX29Q8TEQ0 813 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 SH2D3AQ9BRG2 576 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 UBE2OQ9C0C9 1292 aaKnown RBP23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 PRO3102Q9H379 93 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 CYP26B1Q9NR63 512 aa23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 MORC2Q9Y6X9 1032 aaPredicted RBP23.08■■□□□ 1.29
HMGXB4-203ENST00000420166 ZBTB39O15060 712 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 PARNO95453 639 aaKnown RBP23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 CTSHP09668 335 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 MUTP22033 750 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 RFC2P35250 354 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 EPHB4P54760 987 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 KRT79Q5XKE5 535 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 POTEGQ6S5H5 508 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 CEP170P1Q96L14 293 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 MMTAG2Q9BU76 263 aaKnown RBP23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 ANKEF1Q9NU02 776 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 PPME1Q9Y570 386 aa23.07■■□□□ 1.28
HMGXB4-203ENST00000420166 LOXHD1Q8IVV2 1947 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 RSPH10B2B2RC85 870 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 RSPH10BP0C881 870 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 MARCKSP29966 332 aaPredicted RBP23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 CDC25AP30304 524 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 DDIT3P35638 169 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 SLC39A14Q15043 492 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 FOXD4L6Q3SYB3 417 aaPredicted RBP23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 FAM26DQ5JW98 314 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 FOXD4L3Q6VB84 417 aaPredicted RBP23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 KIAA0319LQ8IZA0 1049 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 METTL13Q8N6R0 699 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 LINC01465Q8N7H1 131 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 ZNF579Q8NAF0 562 aaKnown RBP23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 IL23AQ9NPF7 189 aa23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 TFIP11Q9UBB9 837 aaKnown RBP23.06■■□□□ 1.28
HMGXB4-203ENST00000420166 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 CLCN3P51790 818 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 MRPS6P82932 125 aaKnown RBP23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 GRIN1Q05586 938 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 MBTPS1Q14703 1052 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 GPNMBQ14956 572 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 XKR9Q5GH70 373 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 EFCAB12Q6NXP0 572 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 NME8Q8N427 588 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 PIGOQ8TEQ8 1089 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 VWCEQ96DN2 955 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 AK8Q96MA6 479 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 NACC1Q96RE7 527 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 DAXXQ9UER7 740 aaPredicted RBP23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 TRIOBPQ9H2D6 2365 aa23.05■■□□□ 1.28
HMGXB4-203ENST00000420166 IGKV6-21A0A0C4DH24 114 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 MAFO75444 373 aaPredicted RBP23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 YEATS4O95619 227 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 CHRNA1P02708 482 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 ACRP10323 421 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 TMOD1P28289 359 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 LONP1P36776 959 aaKnown RBP23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 RFC5P40937 340 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 RARRES1P49788 294 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 MGAT3Q09327 533 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 STK38Q15208 465 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 ECM1Q16610 540 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 ATL3Q6DD88 541 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 DEFB128Q7Z7B8 93 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 RPUSD2Q8IZ73 545 aaKnown RBP23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 LRRC71Q8N4P6 559 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 LINC00301Q8NCQ3 95 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 JPH2Q9BR39 696 aaPredicted RBP23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 SUGCTQ9HAC7 445 aa23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 COLQQ9Y215 455 aaPredicted RBP23.04■■□□□ 1.28
HMGXB4-203ENST00000420166 SRPRBQ9Y5M8 271 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms