RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PTH1RQ03431 593 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLCB4Q15147 1175 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM266Q2M3C6 531 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM184AQ6ZMB5 413 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 NCOA7Q8NI08 942 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 RASGRP4Q8TDF6 673 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 MYL10Q9BUA6 226 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 IRF2BPLQ9H1B7 796 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 S1PR5Q9H228 398 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 PSTPIP2Q9H939 334 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 LY9Q9HBG7 655 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLXNA3P51805 1871 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 NFASCO94856 1347 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 C9IYK1 514 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 PROB1E7EW31 1015 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 IGHDP01880 384 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 GSPT1P15170 499 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 UBE2SQ16763 222 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 SYCE2Q6PIF2 218 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLPPR4Q7Z2D5 763 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 NME8Q8N427 588 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 COLGALT1Q8NBJ5 622 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM40Q8WWA1 233 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 LZTS2Q9BRK4 669 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 AZI2Q9H6S1 392 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 DCHS1Q96JQ0 3298 aa11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-202ENST00000420009 ZFHX2Q9C0A1 2572 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 SNPHO15079 494 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 SRGAP2BP0DMP2 458 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 SLC26A2P50443 739 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 ACTR2P61160 394 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 FAM102BQ5T8I3 360 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 ANKRD54Q6NXT1 300 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 MTHFD1LQ6UB35 978 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 ADAM2Q99965 735 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 CWH43Q9H720 699 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 KCNH7Q9NS40 1196 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
TNFAIP3-202ENST00000420009 LOXHD1Q8IVV2 1947 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 IGKV6D-21A0A0A0MT36 114 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 RPS6KA5O75582 802 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 ATG7O95352 703 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 LAG3P18627 525 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 TECP42680 631 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 GNAQP50148 359 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 STAT5BP51692 787 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 ITGB3BPQ13352 177 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 SPOUT1Q5T280 376 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 PLPP4Q5VZY2 271 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 ATOH1Q92858 354 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 RIPOR3Q96MK2 946 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM161AQ9NX61 479 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM260Q9NX78 707 aa11.66□□□□□ -0.54
TNFAIP3-202ENST00000420009 DENND3A2RUS2 1198 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 HIDE1A8MVS5 230 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 H0Y858 1186 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 FGFR1P11362 822 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 HOXB8P17481 243 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 IBSPP21815 317 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 CHMLP26374 656 aa11.65□□□□□ -0.54
TNFAIP3-202ENST00000420009 KLRC1P26715 233 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms