RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 IQUBQ8NA54 791 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
ATG4B-208ENST00000419606 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
ATG4B-208ENST00000419606 LARP4BQ92615 738 aaKnown RBP14.31□□□□□ -0.12
ATG4B-208ENST00000419606 CEP89Q96ST8 783 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 ANKEF1Q9NU02 776 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 SETD4Q9NVD3 440 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 ZNF215Q9UL58 517 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-208ENST00000419606 PHF24Q9UPV7 400 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 BRCA2P51587 3418 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 A0A1W2PQ45 241 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 A0A1W2PQY0 241 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 DNM1LO00429 736 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 HBP1O60381 514 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 KPNA6O60684 536 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 DKC1O60832 514 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 SLC26A2P50443 739 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 IGBP1P78318 339 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 SYT2Q8N9I0 419 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 BBXQ8WY36 941 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 ERCC4Q92889 916 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 CEP170P1Q96L14 293 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 RUSC1Q9BVN2 902 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 NIFKQ9BYG3 293 aaKnown RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 CYP26B1Q9NR63 512 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 NRBP2Q9NSY0 501 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 STK17AQ9UEE5 414 aa14.3□□□□□ -0.12
ATG4B-208ENST00000419606 DBR1Q9UK59 544 aaKnown RBP14.3□□□□□ -0.12
ATG4B-208ENST00000419606 LOXHD1Q8IVV2 1947 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 TRIP12Q14669 1992 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-208ENST00000419606 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 MYMKA6NI61 221 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 USO1O60763 962 aaKnown RBP14.29□□□□□ -0.12
ATG4B-208ENST00000419606 SLFN14P0C7P3 912 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATG4B-208ENST00000419606 CYP11B2P19099 503 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 SOX10P56693 466 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-208ENST00000419606 RAD51AP2Q09MP3 1159 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 CAMK4Q16566 473 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 MARCH8Q5T0T0 291 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 RINT1Q6NUQ1 792 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 SH3RF1Q7Z6J0 888 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 BLZF1Q9H2G9 400 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
ATG4B-208ENST00000419606 KINO60870 393 aaKnown RBP14.28□□□□□ -0.12
ATG4B-208ENST00000419606 EN2P19622 333 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-208ENST00000419606 MDM2Q00987 491 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-208ENST00000419606 PPFIA1Q13136 1202 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 CUL4BQ13620 913 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 GRIK4Q16099 956 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 FAM47CQ5HY64 1035 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 PADI6Q6TGC4 694 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 C1orf186Q6ZWK4 172 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 SV2BQ7L1I2 683 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 KATNAL1Q9BW62 490 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 XPNPEP1Q9NQW7 623 aa14.28□□□□□ -0.12
ATG4B-208ENST00000419606 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 MBD3O95983 291 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 KLRC1P26715 233 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 ADAM17P78536 824 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 DRP2Q13474 957 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 PNOCQ13519 176 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 ZNF484Q5JVG2 852 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
ATG4B-208ENST00000419606 DYMQ7RTS9 669 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 C7orf31Q8N865 590 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 LMBR1Q8WVP7 490 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 TIGD1Q96MW7 591 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 PYM1Q9BRP8 204 aaKnown RBP14.27□□□□□ -0.13
ATG4B-208ENST00000419606 SENP6Q9GZR1 1112 aaPredicted RBP14.27□□□□□ -0.13
ATG4B-208ENST00000419606 CUEDC2Q9H467 287 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 CLSTN2Q9H4D0 955 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 STARD7Q9NQZ5 370 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 PDLIM7Q9NR12 457 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 USP25Q9UHP3 1055 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 EVPLQ92817 2033 aa14.27□□□□□ -0.13
ATG4B-208ENST00000419606 COL1A2P08123 1366 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms