RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 TRAPPC12Q8WVT3 735 aa19.62■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 USP28Q96RU2 1077 aa19.62■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 ANKEF1Q9NU02 776 aa19.62■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 TRIP12Q14669 1992 aaPredicted RBP19.62■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 LTBP2Q14767 1821 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 IGKV6-21A0A0C4DH24 114 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 DDX11L8A8MPP1 907 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 MED24O75448 989 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 CYP4A11Q02928 519 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 PPIGQ13427 754 aaKnown RBP eCLIP19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 RUFY4Q6ZNE9 571 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 RSPH3Q86UC2 560 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 ZNF710Q8N1W2 664 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 LINC01465Q8N7H1 131 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 CYP26B1Q9NR63 512 aa19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 SEPT9Q9UHD8 586 aaPredicted RBP19.61■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 LONP1P36776 959 aaKnown RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 THPOP40225 353 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 MDM2Q00987 491 aaPredicted RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 FPGSQ05932 587 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 HYIQ5T013 277 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 ZNF618Q5T7W0 954 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 LRRC8DQ7L1W4 858 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 RPUSD2Q8IZ73 545 aaKnown RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 LINC00301Q8NCQ3 95 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 NACC1Q96RE7 527 aa19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 JPH2Q9BR39 696 aaPredicted RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 SRPRBQ9Y5M8 271 aaKnown RBP19.6■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 VWA3AA6NCI4 1184 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 MAFO75444 373 aaPredicted RBP19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 YEATS4O95619 227 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 PFKMP08237 780 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 CCL23P55773 120 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 NUCB2P80303 420 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 TBC1D8BQ0IIM8 1120 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 KIAA0319LQ8IZA0 1049 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 DNAJB3Q8WWF6 145 aa19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 FTOQ9C0B1 505 aaKnown RBP eCLIP19.59■□□□□ 0.733e-10■□□□□ 10.5
COMMD3-BMI1-201ENST00000417470 DBR1Q9UK59 544 aaKnown RBP19.59■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 KDM3AQ9Y4C1 1321 aa19.58■□□□□ 0.73
COMMD3-BMI1-201ENST00000417470 RSPH10B2B2RC85 870 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 PPP6R2O75170 966 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CXCL10P02778 98 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 RSPH10BP0C881 870 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CSF2RAP15509 400 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 TMOD1P28289 359 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CCT6AP40227 531 aaKnown RBP19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 RFC5P40937 340 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 MGAT3Q09327 533 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 GPNMBQ14956 572 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 MTERF2Q49AM1 385 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 IER5Q5VY09 327 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 EFCAB12Q6NXP0 572 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 SNX29Q8TEQ0 813 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 VWCEQ96DN2 955 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CEP170P1Q96L14 293 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 DHX33Q9H6R0 707 aaKnown RBP19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 IL23AQ9NPF7 189 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 FBXO2Q9UK22 296 aaPredicted RBP19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CFAP45Q9UL16 551 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 SQORQ9Y6N5 450 aa19.58■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 A0A1W2PPC1 479 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 TMEM150BA6NC51 233 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 ZBTB39O15060 712 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 GAS2O43903 313 aaKnown RBP19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 RARRES1P49788 294 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 NPEPPSP55786 919 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CDC42EP1Q00587 391 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 ECM1Q16610 540 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 FAM43BQ6ZT52 329 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 ZBTB10Q96DT7 871 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 SCLYQ96I15 445 aa19.57■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 PP2D1A8MPX8 630 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CHRNA1P02708 482 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 MRPS6P82932 125 aaKnown RBP19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CEBPZQ03701 1054 aaKnown RBP19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 STK38Q15208 465 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 XKR9Q5GH70 373 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 PLA2G4FQ68DD2 849 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 C16orf59Q7L2K0 433 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 ZNF579Q8NAF0 562 aaKnown RBP19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 UBE2OQ9C0C9 1292 aaKnown RBP19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CCSER1Q9C0I3 900 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 NT5C3AQ9H0P0 336 aa19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 TFIP11Q9UBB9 837 aaKnown RBP19.56■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 SPTLC2O15270 562 aa19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 NBNO60934 754 aa19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 DGAT1O75907 488 aa19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 MARCKSP29966 332 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 CDC25AP30304 524 aa19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 DNM2P50570 870 aa19.55■□□□□ 0.72
COMMD3-BMI1-201ENST00000417470 EPHB4P54760 987 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms