RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 DNA2P51530 1060 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RASSF7Q02833 373 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 LSAMPQ13449 338 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SLC4A8Q2Y0W8 1093 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF658Q5TYW1 1059 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PDXDC2PQ6P474 469 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SEPT14Q6ZU15 432 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 DDX42Q86XP3 938 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 FITM2Q8N6M3 262 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 USP38Q8NB14 1042 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 WDR66Q8TBY9 1149 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 FERMT2Q96AC1 680 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 MTMR8Q96EF0 704 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF333Q96JL9 665 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 INPP4AQ96PE3 977 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 DBNDD2Q9BQY9 259 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 UBAC1Q9BSL1 405 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 BLZF1Q9H2G9 400 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 UNC45AQ9H3U1 944 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ETNK1Q9HBU6 452 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RMND1Q9NWS8 449 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 NMRK1Q9NWW6 199 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SPATA7Q9P0W8 599 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TUBGCP4Q9UGJ1 667 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TMEM59LQ9UK28 342 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 MROH7Q68CQ1 1323 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 MLH3Q9UHC1 1453 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SIGLEC16A6NMB1 481 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ZBTB24O43167 697 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 HNRNPRO43390 633 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 AKR1B10O60218 316 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 CEP104O60308 925 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ATP9AO75110 1047 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TJP3O95049 919 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 GM2AP17900 193 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RXRAP19793 462 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 HNRNPH3P31942 346 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 DHX9Q08211 1270 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TFCP2Q12800 502 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 FIGNQ5HY92 759 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SPDYCQ5MJ68 293 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 KSR2Q6VAB6 950 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 EXOC3L1Q86VI1 746 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 C2CD5Q86YS7 1000 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ANKRD13CQ8N6S4 541 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ARL10Q8N8L6 244 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 STKLD1Q8NE28 680 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TBC1D16Q8TBP0 767 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 LPIN2Q92539 896 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 STAMQ92783 540 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PPP1R14BQ96C90 147 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PGM2Q96G03 612 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 AGAP3Q96P47 875 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PCDH18Q9HCL0 1135 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 FAM114A2Q9NRY5 505 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 TXLNGQ9NUQ3 528 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PAG1Q9NWQ8 432 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ANGEL1Q9UNK9 670 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 PLAGL2Q9UPG8 496 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 ARL2BPQ9Y2Y0 163 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 RIMS1Q86UR5 1692 aaKnown RBP6.93□□□□□ -1.3
CCNT1-202ENST00000417344 XDHP47989 1333 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 STK36Q9NRP7 1315 aa6.93□□□□□ -1.3
CCNT1-202ENST00000417344 C4AP0C0L4 1744 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 C4BP0C0L5 1744 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 TRIM49BA6NDI0 452 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 H0Y3Z8 333 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 WASLO00401 505 aaPredicted RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 PALMO75781 387 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 GFPT2O94808 682 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 LMNAP02545 664 aaKnown RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 YY1P25490 414 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 RXRBP28702 533 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 VHLP40337 213 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 PRCPP42785 496 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 IFNAR2P48551 515 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 EIF4A1P60842 406 aaKnown RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC15Q0P6D6 951 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 NTRK3Q16288 839 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC92Q53HC0 331 aaPredicted RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 GGT6Q6P531 493 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC80Q76M96 950 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 MICU3Q86XE3 530 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 FAM13CQ8NE31 585 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 WASF1Q92558 559 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms