RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 RNF216Q9NWF9 866 aaPredicted RBP28.66■■■□□ 2.18
VEGFA-208ENST00000417285 MUC3AQ02505 3323 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 WDR64B1ANS9 1081 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 EIF5BO60841 1220 aaKnown RBP28.65■■■□□ 2.18
VEGFA-208ENST00000417285 DGKIO75912 1065 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 ANAPC15P60006 121 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 STK3Q13188 491 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 BTG3Q14201 252 aaPredicted RBP28.65■■■□□ 2.18
VEGFA-208ENST00000417285 TIGD5Q53EQ6 642 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 NPAS4Q8IUM7 802 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 CLP1Q92989 425 aaKnown RBP28.65■■■□□ 2.18
VEGFA-208ENST00000417285 FAM167AQ96KS9 214 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 RC3H2Q9HBD1 1191 aaKnown RBP28.65■■■□□ 2.18
VEGFA-208ENST00000417285 NRBP2Q9NSY0 501 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 GABBR1Q9UBS5 961 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 ADGRA3Q8IWK6 1321 aa28.65■■■□□ 2.18
VEGFA-208ENST00000417285 SIP14410 1827 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 ZBTB42B2RXF5 422 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 MSH4O15457 936 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 MAGEB2O15479 319 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 CRIPAKQ8N1N5 446 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 ZNF710Q8N1W2 664 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 C11orf84Q9BUA3 381 aaPredicted RBP28.64■■■□□ 2.18
VEGFA-208ENST00000417285 DISC1Q9NRI5 854 aa28.64■■■□□ 2.18
VEGFA-208ENST00000417285 EDIL3O43854 480 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 SFNP31947 248 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 CTNNB1P35222 781 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 Q4G0T1 1027 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 BLIDQ8IZY5 108 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 BANK1Q8NDB2 785 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 TBCKQ8TEA7 893 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 LINC01599Q8WXQ3 324 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 SLC5A5Q92911 643 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 LMAN2LQ9H0V9 348 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 UBE2ZQ9H832 354 aaPredicted RBP28.63■■■□□ 2.17
VEGFA-208ENST00000417285 GINS2Q9Y248 185 aa28.63■■■□□ 2.17
VEGFA-208ENST00000417285 TTC3P53804 2025 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 BRWD1Q9NSI6 2320 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 CYP3A7-CYP3A51PA0A087WV96 503 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 GPR182O15218 404 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 GAS7O60861 476 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 RPS6KA5O75582 802 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 CDKL5O76039 1030 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 C22orf31O95567 290 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 CYP3A7P24462 503 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 CRYBB1P53674 252 aaPredicted RBP28.62■■■□□ 2.17
VEGFA-208ENST00000417285 NFX1Q12986 1120 aaKnown RBP28.62■■■□□ 2.17
VEGFA-208ENST00000417285 DAGLBQ8NCG7 672 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 PLVAPQ9BX97 442 aa28.62■■■□□ 2.17
VEGFA-208ENST00000417285 JAK3P52333 1124 aa28.61■■■□□ 2.17
VEGFA-208ENST00000417285 CMTR2Q8IYT2 770 aaKnown RBP28.61■■■□□ 2.17
VEGFA-208ENST00000417285 METTL13Q8N6R0 699 aa28.61■■■□□ 2.17
VEGFA-208ENST00000417285 TEKT3Q9BXF9 490 aa28.61■■■□□ 2.17
VEGFA-208ENST00000417285 NCK2O43639 380 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 LINC00271P0C7V0 271 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 TMOD1P28289 359 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 LRCH2Q5VUJ6 765 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 RDM1Q8NG50 284 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 SLKQ9H2G2 1235 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-208ENST00000417285 TMX1Q9H3N1 280 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 NSUN3Q9H649 340 aaKnown RBP28.6■■■□□ 2.17
VEGFA-208ENST00000417285 CDHR5Q9HBB8 845 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 ERVK-5Q9HDB9 667 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 LRFN2Q9ULH4 789 aa28.6■■■□□ 2.17
VEGFA-208ENST00000417285 NOC2LQ9Y3T9 749 aaKnown RBP28.6■■■□□ 2.17
VEGFA-208ENST00000417285 COL4A4P53420 1690 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-208ENST00000417285 M0R2N6 131 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 ANKRD1Q15327 319 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 TMEM266Q2M3C6 531 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 LEXMQ3ZCV2 418 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 NAALADL2Q58DX5 795 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 MOXD1Q6UVY6 613 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 TRMT1LQ7Z2T5 733 aaKnown RBP28.59■■■□□ 2.17
VEGFA-208ENST00000417285 NECAB3Q96P71 396 aaPredicted RBP28.59■■■□□ 2.17
VEGFA-208ENST00000417285 C1orf112Q9NSG2 853 aa28.59■■■□□ 2.17
VEGFA-208ENST00000417285 OATP04181 439 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 XBP1P17861 261 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 SARSP49591 514 aaKnown RBP28.58■■■□□ 2.17
VEGFA-208ENST00000417285 SCRN1Q12765 414 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 KRT25Q7Z3Z0 450 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 RGS18Q9NS28 235 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 ST3GAL5Q9UNP4 418 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 PCDHB7Q9Y5E2 793 aa28.58■■■□□ 2.17
VEGFA-208ENST00000417285 DENND3A2RUS2 1198 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 GPR32O75388 356 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 PSMD10O75832 226 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 NONOQ15233 471 aaKnown RBP eCLIP28.57■■■□□ 2.163e-6■■■□□ 16.3
VEGFA-208ENST00000417285 KIZQ2M2Z5 673 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 PUS10Q3MIT2 529 aaKnown RBP28.57■■■□□ 2.16
VEGFA-208ENST00000417285 EFCAB12Q6NXP0 572 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 SLC24A5Q71RS6 500 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 P2RX5Q93086 422 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 MAP7D2Q96T17 732 aa28.57■■■□□ 2.16
VEGFA-208ENST00000417285 PFKFB2O60825 505 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 KCNA5P22460 613 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 TCEAL5Q5H9L2 206 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 TMEM40Q8WWA1 233 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 MBOAT7Q96N66 472 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 ADAM2Q99965 735 aa28.56■■■□□ 2.16
VEGFA-208ENST00000417285 UNC45AQ9H3U1 944 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms