RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 ATG4CQ96DT6 458 aa12.52□□□□□ -0.41
RUBCN-204ENST00000415452 C12orf42Q96LP6 360 aa12.52□□□□□ -0.41
RUBCN-204ENST00000415452 METTL14Q9HCE5 456 aaKnown RBP12.52□□□□□ -0.41
RUBCN-204ENST00000415452 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.41
RUBCN-204ENST00000415452 ARHGAP20Q9P2F6 1191 aa12.52□□□□□ -0.41
RUBCN-204ENST00000415452 ASTN1O14525 1302 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 UBE4BO95155 1302 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 ARHGEF35A5YM69 484 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 C19orf81C9J6K1 198 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 SLC16A3O15427 465 aaKnown RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 NR3C1P04150 777 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 GUCY2CP25092 1073 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 GABPB1Q06547 395 aaPredicted RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 LSM14BQ9BX40 385 aaKnown RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 ZSWIM4Q9H7M6 989 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 NOL4O94818 638 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 LCA5LO95447 670 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 VAV2P52735 878 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 SATB1Q01826 763 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
RUBCN-204ENST00000415452 NFIL3Q16649 462 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 PRAMEF18Q5VWM3 479 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 FBXO38Q6PIJ6 1188 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 CEP120Q8N960 986 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 TRPM4Q8TD43 1214 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 TRIM10Q9UDY6 481 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 MYH11P35749 1972 aa12.51□□□□□ -0.41
RUBCN-204ENST00000415452 PLEKP08567 350 aaPredicted RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 OAZ1P54368 228 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 ZNF720Q7Z2F6 126 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 FAM178BQ8IXR5 827 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 GPC2Q8N158 579 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 PDCD2LQ9BRP1 358 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 DEF6Q9H4E7 631 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 RNF146Q9NTX7 359 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 PHIPQ8WWQ0 1821 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 RLFQ13129 1914 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 TGFB1I1O43294 461 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 AKAP3O75969 853 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 DSG3P32926 999 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 KIF11P52732 1056 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 CYP27A1Q02318 531 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 KCNA1Q09470 495 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 KIF5AQ12840 1032 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 XRRA1Q6P2D8 792 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 NSMFQ6X4W1 530 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 FIZ1Q96SL8 496 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 NLRC4Q9NPP4 1024 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 DBR1Q9UK59 544 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
RUBCN-204ENST00000415452 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
RUBCN-204ENST00000415452 COL11A1P12107 1806 aaPredicted RBP12.49□□□□□ -0.41
RUBCN-204ENST00000415452 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 ZNF263O14978 683 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 AKR1B10O60218 316 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 QARSP47897 775 aaKnown RBP12.49□□□□□ -0.41
RUBCN-204ENST00000415452 HMGCS2P54868 508 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
RUBCN-204ENST00000415452 COG2Q14746 738 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 ODR4Q5SWX8 454 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 GOLGA1Q92805 767 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 LACRTQ9GZZ8 138 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 GGA3Q9NZ52 723 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 ZMYM2Q9UBW7 1377 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 CLIC2O15247 247 aa12.49□□□□□ -0.41
RUBCN-204ENST00000415452 USO1O60763 962 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms