RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 FOXR2Q6PJQ5 311 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 RAD9BQ6WBX8 426 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 GPBP1Q86WP2 473 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 FAM133AQ8N9E0 248 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 DYDC2Q96IM9 177 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 NACC1Q96RE7 527 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ST7Q9NRC1 585 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 GDAQ9Y2T3 454 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 WDR64B1ANS9 1081 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 PDHXO00330 501 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 MAP2K7O14733 419 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 CHMP2AO43633 222 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 LYPLA2O95372 231 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 COPB1P53618 953 aaKnown RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 STX17P56962 302 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 CST9Q5W186 159 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 NELFBQ8WX92 580 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 IQCDQ96DY2 449 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 MED15Q96RN5 788 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 TXNRD2Q9NNW7 524 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 RGL1Q9NZL6 768 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 GYPCP04921 128 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
RFFL-205ENST00000415395 EEF1GP26641 437 aaKnown RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 CKAP4Q07065 602 aaKnown RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 COASYQ13057 564 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 KRT31Q15323 416 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 LEKR1Q6ZMV7 388 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 DYMQ7RTS9 669 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 TPH2Q8IWU9 490 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 GOLGA5Q8TBA6 731 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 SMCR8Q8TEV9 937 aaPredicted RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 LXNQ9BS40 222 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 HAUS4Q9H6D7 363 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 MAGEC2Q9UBF1 373 aaPredicted RBP12.75□□□□□ -0.37
RFFL-205ENST00000415395 MORF4L1Q9UBU8 362 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
RFFL-205ENST00000415395 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 DKC1O60832 514 aaKnown RBP eCLIP12.74□□□□□ -0.37
RFFL-205ENST00000415395 SASH3O75995 380 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
RFFL-205ENST00000415395 IVLP07476 585 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 FCER1AP12319 257 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 IDEP14735 1019 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KCNA2P16389 499 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 CCNE1P24864 410 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 PSMC6P62333 389 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KRT83P78385 493 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 STK4Q13043 487 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
RFFL-205ENST00000415395 KCNJ12Q14500 433 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KCTD2Q14681 263 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 MTF1Q14872 753 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 PTPN21Q16825 1174 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 TCP11X2Q5H9J9 407 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 GOLGA6L1Q8N7Z2 621 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 MMP19Q99542 508 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 BHMT2Q9H2M3 363 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 PANK4Q9NVE7 773 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 ASTN1O14525 1302 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 ATP9AO75110 1047 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 RGS20O76081 388 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
RFFL-205ENST00000415395 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
RFFL-205ENST00000415395 HUNKP57058 714 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 GIT2Q14161 759 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 Q3C1V9 767 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 FAM114A1Q8IWE2 563 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 ABRAQ8N0Z2 381 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 SLC35F6Q8N357 371 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 KIAA0895Q8NCT3 520 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 P2RX5Q93086 422 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 MED4Q9NPJ6 270 aa12.74□□□□□ -0.37
RFFL-205ENST00000415395 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms