RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PTPN18Q99952 460 aa7.82□□□□□ -1.16
ATG4C-204ENST00000414558 ST6GALNAC2Q9UJ37 374 aa7.82□□□□□ -1.16
ATG4C-204ENST00000414558 PTPN22Q9Y2R2 807 aa7.82□□□□□ -1.16
ATG4C-204ENST00000414558 GOLGA6L22H0YM25 854 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 KRT37O76014 449 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 ZNF20P17024 532 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 FNTBP49356 437 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 KCNQ1P51787 676 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 CD83Q01151 205 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 PABPC4Q13310 644 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATG4C-204ENST00000414558 ZNF460Q14592 562 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 ICAM4Q14773 271 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 TCEA2Q15560 299 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 HOMER1Q86YM7 354 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 E2F7Q96AV8 911 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
ATG4C-204ENST00000414558 INTS7Q9NVH2 962 aaKnown RBP7.81□□□□□ -1.16
ATG4C-204ENST00000414558 A0A0G2JNJ9 132 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 RANGAP1P46060 587 aaPredicted RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 RRADP55042 308 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 RAC3P60763 192 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 EIF4HQ15056 248 aaKnown RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 ZXDCQ2QGD7 858 aaPredicted RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 PIK3R6Q5UE93 754 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 TMEM200BQ69YZ2 307 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 GRAMD4Q6IC98 578 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 NEIL1Q96FI4 390 aaPredicted RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 RNPC3Q96LT9 517 aaKnown RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 LRRC37BQ96QE4 947 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 PCIF1Q9H4Z3 704 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 MAGEC2Q9UBF1 373 aaPredicted RBP7.8□□□□□ -1.16
ATG4C-204ENST00000414558 Q9UFV3 132 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 MYRFQ9Y2G1 1151 aa7.8□□□□□ -1.16
ATG4C-204ENST00000414558 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
ATG4C-204ENST00000414558 JMJD7P0C870 316 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 SDSP20132 328 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 APEX1P27695 318 aaKnown RBP7.79□□□□□ -1.16
ATG4C-204ENST00000414558 KIF11P52732 1056 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 ALDH6A1Q02252 535 aaKnown RBP7.79□□□□□ -1.16
ATG4C-204ENST00000414558 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 MOGSQ13724 837 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 ERCC4Q92889 916 aaPredicted RBP7.79□□□□□ -1.16
ATG4C-204ENST00000414558 FOXB1Q99853 325 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 CD248Q9HCU0 757 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 ACSS2Q9NR19 701 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 CDC42EP3Q9UKI2 254 aa7.79□□□□□ -1.16
ATG4C-204ENST00000414558 PTPDC1A2A3K4 754 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 C1QTNF3-AMACRE9PGA6 284 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 H7C1D1 291 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 INSRRP14616 1297 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 MEOX1P50221 254 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 CDCA2Q69YH5 1023 aaPredicted RBP7.78□□□□□ -1.16
ATG4C-204ENST00000414558 RTKN2Q8IZC4 609 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 GIMAP8Q8ND71 665 aaPredicted RBP7.78□□□□□ -1.16
ATG4C-204ENST00000414558 APPBP2Q92624 585 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 FOXRED1Q96CU9 486 aaPredicted RBP7.78□□□□□ -1.16
ATG4C-204ENST00000414558 GNRHR2Q96P88 292 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 CDK5RAP1Q96SZ6 601 aaKnown RBP7.78□□□□□ -1.16
ATG4C-204ENST00000414558 DEF6Q9H4E7 631 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 B4GALT6Q9UBX8 382 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 NR2E1Q9Y466 385 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 TCAF1Q9Y4C2 921 aa7.78□□□□□ -1.16
ATG4C-204ENST00000414558 CBX4O00257 560 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 TRAF5O00463 557 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 NFYCQ13952 458 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 ZNF174Q15697 407 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 RNF151Q2KHN1 245 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 AGBL4Q5VU57 503 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 TRIM68Q6AZZ1 485 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 C16orf86Q6ZW13 317 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 RTN4RL1Q86UN2 441 aaPredicted RBP7.77□□□□□ -1.17
ATG4C-204ENST00000414558 GGNQ86UU5 652 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 KRTAP4-11Q9BYQ6 195 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 KLC2Q9H0B6 622 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 OAZ3Q9UMX2 235 aa7.77□□□□□ -1.17
ATG4C-204ENST00000414558 DVL2O14641 736 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 ARHGAP6O43182 974 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 ZNF623O75123 536 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 CYP17A1P05093 508 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 SELENOPP49908 381 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 ROM1Q03395 351 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 PCOLCEQ15113 449 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 HS1BP3Q53T59 392 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 USP30Q70CQ3 517 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 LARP4Q71RC2 724 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATG4C-204ENST00000414558 TAX1BP1Q86VP1 789 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 KIAA1958Q8N8K9 716 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 KIAA1683Q9H0B3 1180 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 OR10A2Q9H208 303 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 SEMA4AQ9H3S1 761 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 MSL2Q9HCI7 577 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 FANCLQ9NW38 375 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 TSC22D4Q9Y3Q8 395 aa7.76□□□□□ -1.17
ATG4C-204ENST00000414558 CR2P20023 1033 aa7.75□□□□□ -1.17
ATG4C-204ENST00000414558 MRE11P49959 708 aa7.75□□□□□ -1.17
ATG4C-204ENST00000414558 PUM1Q14671 1186 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATG4C-204ENST00000414558 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms