RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 EIF2AK1Q9BQI3 630 aaKnown RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 PAK6Q9NQU5 681 aaPredicted RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 RGL1Q9NZL6 768 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 DDX20Q9UHI6 824 aaKnown RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 A0A087X0B3 334 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SLC26A4O43511 780 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ACTN4O43707 911 aaKnown RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 MSCO60682 206 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ADAMTS4O75173 837 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MED24O75448 989 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 LGR5O75473 907 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 P4HBP07237 508 aaKnown RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 PSAPP07602 524 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SUPT20HL2P0C7V6 817 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 RARBP10826 455 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ATP1A3P13637 1013 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 TCF7P36402 384 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 SP4Q02446 784 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MTFR1Q15390 333 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ECM1Q16610 540 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 TMC6Q7Z403 805 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ZNF333Q96JL9 665 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-202ENST00000414411 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SERTAD1Q9UHV2 236 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MAN1B1Q9UKM7 699 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SAMM50Q9Y512 469 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MAFBQ9Y5Q3 323 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 SYNRGQ9UMZ2 1314 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 MMP3P08254 477 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MUTP22033 750 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SARSP49591 514 aaKnown RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 GRB10Q13322 594 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 DHX8Q14562 1220 aaKnown RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 TPD52L1Q16890 204 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 HAUS3Q68CZ6 603 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SWSAP1Q6NVH7 229 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 KANK3Q6NY19 840 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 CABP7Q86V35 215 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 CCDC60Q8IWA6 550 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 KLHDC9Q8NEP7 349 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ERMNQ8TAM6 284 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 NEK9Q8TD19 979 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 SNX29Q8TEQ0 813 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 DYDC2Q96IM9 177 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 AP5M1Q9H0R1 490 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 KCND1Q9NSA2 647 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 WRAP73Q9P2S5 460 aaPredicted RBP11.07□□□□□ -0.64
DDB1-202ENST00000414411 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
DDB1-202ENST00000414411 ZNF862O60290 1169 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 STBD1O95210 358 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 LYPLA2O95372 231 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 PGK1P00558 417 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 CCL5P13501 91 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 TNNT1P13805 278 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 ATP4AP20648 1035 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 CCT6AP40227 531 aaKnown RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 QARSP47897 775 aaKnown RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 CPT1AP50416 773 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 CYP4A11Q02928 519 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 CTTNQ14247 550 aaKnown RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 KARSQ15046 597 aaKnown RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 FSCN1Q16658 493 aaKnown RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 UGCGQ16739 394 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 CCSAPQ6IQ19 270 aaPredicted RBP11.06□□□□□ -0.64
DDB1-202ENST00000414411 PDILTQ8N807 584 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 TRIML1Q8N9V2 468 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 LRRC15Q8TF66 581 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 PDCL3Q9H2J4 239 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 ZSWIM4Q9H7M6 989 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 XPNPEP3Q9NQH7 507 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 EMSYQ7Z589 1322 aa11.06□□□□□ -0.64
DDB1-202ENST00000414411 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 USP27XA6NNY8 438 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 CBFA2T2O43439 604 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
DDB1-202ENST00000414411 CST5P28325 142 aaPredicted RBP11.05□□□□□ -0.64
DDB1-202ENST00000414411 PSEN1P49768 467 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 STAT5BP51692 787 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 PSMC5P62195 406 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 BEX3Q00994 111 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 MORC3Q14149 939 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 E2F4Q16254 413 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 DGKDQ16760 1214 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 NAALADL2Q58DX5 795 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms