RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RAB30Q15771 203 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
CHD1-202ENST00000414220 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
CHD1-202ENST00000414220 TRPV2Q9Y5S1 764 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 EML1O00423 815 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 ZNF862O60290 1169 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
CHD1-202ENST00000414220 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
CHD1-202ENST00000414220 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 ZNF697Q5TEC3 545 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 EFCAB12Q6NXP0 572 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 BRAPQ7Z569 592 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 DBF4BQ8NFT6 615 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
CHD1-202ENST00000414220 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
CHD1-202ENST00000414220 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 SOX1O00570 391 aaPredicted RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 C22orf31O95567 290 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 CHRNA1P02708 482 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 AMHP03971 560 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 TECP42680 631 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 UGCGQ16739 394 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 SLC7A3Q8WY07 619 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 LRCH3Q96II8 777 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 DYDC2Q96IM9 177 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 EIF2AK1Q9BQI3 630 aaKnown RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 LXNQ9BS40 222 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 IFIH1Q9BYX4 1025 aaKnown RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 CXXC1Q9P0U4 656 aaPredicted RBP16.47■□□□□ 0.23
CHD1-202ENST00000414220 AKT3Q9Y243 479 aa16.47■□□□□ 0.23
CHD1-202ENST00000414220 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 GHRP10912 638 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 YWHABP31946 246 aaKnown RBP16.46■□□□□ 0.23
CHD1-202ENST00000414220 CYP4A11Q02928 519 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 MGAT3Q09327 533 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 GPNMBQ14956 572 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 CEP170P1Q96L14 293 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 TMEM60Q9H2L4 133 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
CHD1-202ENST00000414220 GINS2Q9Y248 185 aa16.46■□□□□ 0.23
CHD1-202ENST00000414220 KDM3AQ9Y4C1 1321 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 ZBTB42B2RXF5 422 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 SLITRK3O94933 977 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 BMP15O95972 392 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 RFC5P40937 340 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 POLGP54098 1239 aaPredicted RBP16.45■□□□□ 0.22
CHD1-202ENST00000414220 PAK2Q13177 524 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 PTGDRQ13258 359 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 CTTNQ14247 550 aaKnown RBP16.45■□□□□ 0.22
CHD1-202ENST00000414220 PDIA5Q14554 519 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
CHD1-202ENST00000414220 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 DTHD1Q6ZMT9 781 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 ZBTB10Q96DT7 871 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 TUFT1Q9NNX1 390 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 CYP26B1Q9NR63 512 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 RGL1Q9NZL6 768 aa16.45■□□□□ 0.22
CHD1-202ENST00000414220 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
CHD1-202ENST00000414220 WNT7AO00755 349 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 GPR182O15218 404 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 GAS2O43903 313 aaKnown RBP16.44■□□□□ 0.22
CHD1-202ENST00000414220 MAFO75444 373 aaPredicted RBP16.44■□□□□ 0.22
CHD1-202ENST00000414220 LYPLA2O95372 231 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
CHD1-202ENST00000414220 MUTP22033 750 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 DNAJB2P25686 324 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 PRPHP41219 470 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.228e-7■■■■■ 29.8
CHD1-202ENST00000414220 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
CHD1-202ENST00000414220 WDR5P61964 334 aaKnown RBP16.44■□□□□ 0.22
CHD1-202ENST00000414220 XKR9Q5GH70 373 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 TCP11Q8WWU5 503 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 VWCEQ96DN2 955 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 HSD17B14Q9BPX1 270 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 SLC28A3Q9HAS3 691 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 LRWD1Q9UFC0 647 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 PCDHA11Q9Y5I1 949 aa16.44■□□□□ 0.22
CHD1-202ENST00000414220 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms