RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TRDNQ13061 729 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 WTAPQ15007 396 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 FAM102BQ5T8I3 360 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 TMEM105Q8N8V8 129 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 KREMEN2Q8NCW0 462 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 RRP36Q96EU6 259 aaKnown RBP10.95□□□□□ -0.66
RFFL-203ENST00000413582 APOL5Q9BWW9 433 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
RFFL-203ENST00000413582 CWH43Q9H720 699 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 C1orf112Q9NSG2 853 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 TYW1Q9NV66 732 aaKnown RBP10.95□□□□□ -0.66
RFFL-203ENST00000413582 TMEM260Q9NX78 707 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 PCDHB7Q9Y5E2 793 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 TAF6LQ9Y6J9 622 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
RFFL-203ENST00000413582 C9IYK1 514 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 BRD1O95696 1058 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 FGFR1P11362 822 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 HOXB8P17481 243 aaPredicted RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 LAG3P18627 525 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 ANTXR2P58335 489 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 PLCB3Q01970 1234 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 SART3Q15020 963 aaKnown RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 UBE2SQ16763 222 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 LLGL2Q6P1M3 1020 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 FAM43BQ6ZT52 329 aaPredicted RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 SLC24A5Q71RS6 500 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 CHD1LQ86WJ1 897 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 UBALD2Q8IYN6 164 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 NME8Q8N427 588 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 MRPS27Q92552 414 aaKnown RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 ADAM2Q99965 735 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 TCF25Q9BQ70 676 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 SMOC2Q9H3U7 446 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 POMKQ9H5K3 350 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 AZI2Q9H6S1 392 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 JADE2Q9NQC1 790 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 RGS18Q9NS28 235 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 SLC9A2Q9UBY0 812 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 SORCS3Q9UPU3 1222 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
RFFL-203ENST00000413582 ZNF292O60281 2723 aa10.94□□□□□ -0.66
RFFL-203ENST00000413582 DENND3A2RUS2 1198 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 HIDE1A8MVS5 230 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 C2CD4DB7Z1M9 353 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 MAFGO15525 162 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 RPS6KA5O75582 802 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 DDAH1O94760 285 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 PLEKHA8P1O95397 391 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 PDE4AP27815 886 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 ACTR2P61160 394 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 NUCB1Q02818 461 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 MTHFD1LQ6UB35 978 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 CENPQQ7L2Z9 268 aaPredicted RBP10.93□□□□□ -0.66
RFFL-203ENST00000413582 PLPPR4Q7Z2D5 763 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
RFFL-203ENST00000413582 IGDCC4Q8TDY8 1250 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 PSTPIP2Q9H939 334 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 ENTPD7Q9NQZ7 604 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 GINS2Q9Y248 185 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 NR2E1Q9Y466 385 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 CACNA1BQ00975 2339 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 CEP250Q9BV73 2442 aa10.93□□□□□ -0.66
RFFL-203ENST00000413582 MYH9P35579 1960 aaKnown RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 NFASCO94856 1347 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 DMXL1Q9Y485 3027 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 E7EWF7 191 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 KIF5BP33176 963 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 STAT5BP51692 787 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 LRRC55Q6ZSA7 311 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 ERMP1Q7Z2K6 904 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 FAM228AQ86W67 206 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 KIAA0319LQ8IZA0 1049 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 SRBD1Q8N5C6 995 aaKnown RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 CASP10Q92851 521 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 TNPO1Q92973 898 aaKnown RBP10.92□□□□□ -0.66
RFFL-203ENST00000413582 NECTIN4Q96NY8 510 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 ATP6V0A4Q9HBG4 840 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 LY9Q9HBG7 655 aa10.92□□□□□ -0.66
RFFL-203ENST00000413582 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms