RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NRBP2Q9NSY0 501 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 VAV3Q9UKW4 847 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 TRPV2Q9Y5S1 764 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 TTC3P53804 2025 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 CDH23Q9H251 3354 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 COL6A3P12111 3177 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 EML1O00423 815 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 C22orf31O95567 290 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 PPP2R5CQ13362 524 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 FBXO47Q5MNV8 452 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 FBXO18Q8NFZ0 1043 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 MYLIPQ8WY64 445 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 CHD7Q9P2D1 2997 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 CEP131Q9UPN4 1083 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 STXBP5LQ9Y2K9 1186 aa21.21■□□□□ 0.99
TRIM56-202ENST00000412507 KIF28PB7ZC32 967 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 M0QZ92 97 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 BAG4O95429 457 aaKnown RBP21.2■□□□□ 0.98
TRIM56-202ENST00000412507 CA3P07451 260 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 MKRN4PQ13434 485 aaPredicted RBP21.2■□□□□ 0.98
TRIM56-202ENST00000412507 FAM117BQ6P1L5 589 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 KIAA0319LQ8IZA0 1049 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 NME8Q8N427 588 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 BANK1Q8NDB2 785 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 APBB2Q92870 758 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 ZBED2Q9BTP6 218 aa21.2■□□□□ 0.98
TRIM56-202ENST00000412507 CELF4Q9BZC1 486 aaKnown RBP21.2■□□□□ 0.98
TRIM56-202ENST00000412507 TLL1O43897 1013 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 ATP2B1P20020 1258 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 PPP2R2DQ66LE6 453 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 SLFN12Q8IYM2 578 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 MYOCDQ8IZQ8 938 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 METTL13Q8N6R0 699 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 TRANK1O15050 2925 aa21.19■□□□□ 0.98
TRIM56-202ENST00000412507 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.18■□□□□ 0.98
TRIM56-202ENST00000412507 TMEM150BA6NC51 233 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 STBD1O95210 358 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 AMHP03971 560 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 MCM2P49736 904 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 CALCRLQ16602 461 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 XKR3Q5GH77 459 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 NCAPH2Q6IBW4 605 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 TSHZ1Q6ZSZ6 1077 aa21.18■□□□□ 0.98
TRIM56-202ENST00000412507 FOXP1Q9H334 677 aaPredicted RBP21.18■□□□□ 0.98
TRIM56-202ENST00000412507 AGO3Q9H9G7 860 aaKnown RBP21.18■□□□□ 0.98
TRIM56-202ENST00000412507 SEPT9Q9UHD8 586 aaPredicted RBP21.18■□□□□ 0.98
TRIM56-202ENST00000412507 COL4A4P53420 1690 aaPredicted RBP21.18■□□□□ 0.98
TRIM56-202ENST00000412507 MAGEB2O15479 319 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 GJB5O95377 273 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 CD52P31358 61 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 CLCN3P51790 818 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 PSMC5P62195 406 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 GNL2Q13823 731 aaKnown RBP21.17■□□□□ 0.98
TRIM56-202ENST00000412507 MTERF2Q49AM1 385 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 EFCAB12Q6NXP0 572 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 PPP1R16BQ96T49 567 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 SH2D3AQ9BRG2 576 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 PRDM12Q9H4Q4 367 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 CDHR5Q9HBB8 845 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 GINS2Q9Y248 185 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 KDM3AQ9Y4C1 1321 aa21.17■□□□□ 0.98
TRIM56-202ENST00000412507 RALGAPA2Q2PPJ7 1873 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 LCHNA4D1U4 455 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 DDX11L8A8MPP1 907 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 NEMFO60524 1076 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 ARHGEF15O94989 841 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 VTNP04004 478 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 MCM7P33993 719 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 QARSP47897 775 aaKnown RBP21.16■□□□□ 0.98
TRIM56-202ENST00000412507 SPIRE1Q08AE8 756 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 EPHA7Q15375 998 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 TARBP2Q15633 366 aaKnown RBP21.16■□□□□ 0.98
TRIM56-202ENST00000412507 LRRC71Q8N4P6 559 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 NIFKQ9BYG3 293 aaKnown RBP21.16■□□□□ 0.98
TRIM56-202ENST00000412507 SQORQ9Y6N5 450 aa21.16■□□□□ 0.98
TRIM56-202ENST00000412507 KIAA1671Q9BY89 1806 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 UPP2O95045 317 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
TRIM56-202ENST00000412507 FOSL2P15408 326 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 TXKP42681 527 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 TBC1D8BQ0IIM8 1120 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 LINC01465Q8N7H1 131 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 USP38Q8NB14 1042 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 RAD9AQ99638 391 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 TMEM60Q9H2L4 133 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 TTC12Q9H892 705 aaPredicted RBP21.15■□□□□ 0.98
TRIM56-202ENST00000412507 CERS4Q9HA82 394 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 SUGCTQ9HAC7 445 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 PADI3Q9ULW8 664 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 PCDHA12Q9UN75 941 aa21.15■□□□□ 0.98
TRIM56-202ENST00000412507 FNDC1Q4ZHG4 1894 aaPredicted RBP21.14■□□□□ 0.97
TRIM56-202ENST00000412507 TMOD1P28289 359 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 GJB2P29033 226 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 TAP1Q03518 808 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 PAK2Q13177 524 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 ZNF174Q15697 407 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 KIZQ2M2Z5 673 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 TMEM266Q2M3C6 531 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 PLA2G4FQ68DD2 849 aa21.14■□□□□ 0.97
TRIM56-202ENST00000412507 ANO5Q75V66 913 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms