RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CLCN3P51790 818 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 RBL2Q08999 1139 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 IL17AQ16552 155 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 ANO5Q75V66 913 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
NEDD1-202ENST00000411739 PCDHA2Q9Y5H9 948 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
NEDD1-202ENST00000411739 TAF2Q6P1X5 1199 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 TMCO2Q7Z6W1 182 aaPredicted RBP13.44□□□□□ -0.26
NEDD1-202ENST00000411739 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 TNPO1Q92973 898 aaKnown RBP13.44□□□□□ -0.26
NEDD1-202ENST00000411739 CDHR5Q9HBB8 845 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 MTMR6Q9Y217 621 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 CDY2AQ9Y6F7 541 aa13.44□□□□□ -0.26
NEDD1-202ENST00000411739 PP2D1A8MPX8 630 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 VTNP04004 478 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 GHRP10912 638 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 PDCP20941 246 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 CDC25AP30304 524 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 FXR1P51114 621 aaKnown RBP eCLIP13.43□□□□□ -0.26
NEDD1-202ENST00000411739 DRP2Q13474 957 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 PSRC1Q6PGN9 363 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-202ENST00000411739 FAM167AQ96KS9 214 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 EVPLQ92817 2033 aa13.43□□□□□ -0.26
NEDD1-202ENST00000411739 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
NEDD1-202ENST00000411739 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-202ENST00000411739 RILPL1Q5EBL4 403 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 EFCAB12Q6NXP0 572 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
NEDD1-202ENST00000411739 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 HSD17B14Q9BPX1 270 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 STX6O43752 255 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 MED24O75448 989 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
NEDD1-202ENST00000411739 RESTQ13127 1097 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
NEDD1-202ENST00000411739 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 A0A1W2PPC1 479 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 YWHABP31946 246 aaKnown RBP13.41□□□□□ -0.26
NEDD1-202ENST00000411739 RFC2P35250 354 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 MGAT3Q09327 533 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 TBC1D8BQ0IIM8 1120 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 PKP1Q13835 747 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 TARBP2Q15633 366 aaKnown RBP13.41□□□□□ -0.26
NEDD1-202ENST00000411739 KIZQ2M2Z5 673 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CEP170P1Q96L14 293 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
NEDD1-202ENST00000411739 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 COL1A2P08123 1366 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 RABGGTBP53611 331 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-202ENST00000411739 ECM1Q16610 540 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 XKR9Q5GH70 373 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CEP131Q9UPN4 1083 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
NEDD1-202ENST00000411739 CXCL10P02778 98 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 PBX2P40425 430 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 LPIN1Q14693 890 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 FAM26DQ5JW98 314 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 VWA3AA6NCI4 1184 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 CD52P31358 61 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 IER5Q5VY09 327 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
NEDD1-202ENST00000411739 LRWD1Q9UFC0 647 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
NEDD1-202ENST00000411739 MYOGP15173 224 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 DEFB103AP81534 67 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 GRIN1Q05586 938 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 FBXO47Q5MNV8 452 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■■□ 20.9
NEDD1-202ENST00000411739 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 OSMRQ99650 979 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms