RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
TTC39A-207ENST00000411642 DAXXQ9UER7 740 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-207ENST00000411642 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
TTC39A-207ENST00000411642 LAMA3Q16787 3333 aa11.27□□□□□ -0.61
TTC39A-207ENST00000411642 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CTSHP09668 335 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 SPATA31C1P0DKV0 1188 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CSF2RAP15509 400 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 SELPP16109 830 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 RPA1P27694 616 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 NPEPPSP55786 919 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 TARBP2Q15633 366 aaKnown RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 LRRC8DQ7L1W4 858 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CATSPER3Q86XQ3 398 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 ZNF396Q96N95 335 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 GDF15Q99988 308 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 NIFKQ9BYG3 293 aaKnown RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-207ENST00000411642 TUFT1Q9NNX1 390 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
TTC39A-207ENST00000411642 GBF1Q92538 1859 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 ZBTB39O15060 712 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 MAGEB2O15479 319 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 CAND2O75155 1236 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 LYPLA2O95372 231 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 MARCKSP29966 332 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 CDC25AP30304 524 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 GRIN1Q05586 938 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 STK38Q15208 465 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 XKR9Q5GH70 373 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 OTUD6AQ7L8S5 288 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 RPAINQ86UA6 219 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 LRRC71Q8N4P6 559 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 METTL13Q8N6R0 699 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 PIGOQ8TEQ8 1089 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 CEP170P1Q96L14 293 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 CCDC43Q96MW1 224 aaKnown RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 CEP89Q96ST8 783 aa11.25□□□□□ -0.61
TTC39A-207ENST00000411642 UBE2OQ9C0C9 1292 aaKnown RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
TTC39A-207ENST00000411642 A0A087WWV3 80 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 ACRP10323 421 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 MUTP22033 750 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 TMOD1P28289 359 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 RFC2P35250 354 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 CLCN3P51790 818 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 EPHB4P54760 987 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 MRPS6P82932 125 aaKnown RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 SLC39A14Q15043 492 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 ECM1Q16610 540 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 EFCAB12Q6NXP0 572 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 DEFB128Q7Z7B8 93 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 KIAA0319LQ8IZA0 1049 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 AK8Q96MA6 479 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 MMTAG2Q9BU76 263 aaKnown RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-207ENST00000411642 PPME1Q9Y570 386 aa11.24□□□□□ -0.61
TTC39A-207ENST00000411642 M0QZ92 97 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 SPTLC2O15270 562 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 MAFO75444 373 aaPredicted RBP11.23□□□□□ -0.61
TTC39A-207ENST00000411642 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
TTC39A-207ENST00000411642 YEATS4O95619 227 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 VTNP04004 478 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 PFKMP08237 780 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 BMP8BP34820 402 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 DDIT3P35638 169 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 RFC5P40937 340 aa11.23□□□□□ -0.61
TTC39A-207ENST00000411642 UBA7P41226 1012 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms