RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 LARGE2Q8N3Y3 721 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 SH3TC2Q8TF17 1288 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 CHAC2Q8WUX2 184 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 LEO1Q8WVC0 666 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 SPIRE2Q8WWL2 714 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 RAB3IPQ96QF0 476 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 HERPUD2Q9BSE4 406 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 FAM167BQ9BTA0 163 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 TRIM62Q9BVG3 475 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 NUSAP1Q9BXS6 441 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 EIF2B3Q9NR50 452 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 FBXO40Q9UH90 709 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 USP16Q9Y5T5 823 aa5.62□□□□□ -1.51
R3HDM1-204ENST00000410054 POM121CA8CG34 1229 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 M0R2C6 588 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SURF6O75683 361 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CSF1RP07333 972 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CLTBP09497 229 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 KRT3P12035 628 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SERPINB3P29508 390 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 NPTX2P47972 431 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 COPB1P53618 953 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 COPAP53621 1224 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ARF3P61204 181 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 IRX4P78413 519 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ARF1P84077 181 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PTK2Q05397 1052 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 KLHL30Q0D2K2 578 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 USF2Q15853 346 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 USH1GQ495M9 461 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CCDC58Q4VC31 144 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SNRNP48Q6IEG0 339 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 VPS52Q8N1B4 723 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 GOLM1Q8NBJ4 401 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 URGCPQ8TCY9 931 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 HDAC2Q92769 488 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 C7orf25Q9BPX7 421 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 MYLK2Q9H1R3 596 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PIF1Q9H611 641 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PHAXQ9H814 394 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 BTBD7Q9P203 1132 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 RPS6KA6Q9UK32 745 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 AURKCQ9UQB9 309 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 RUVBL1Q9Y265 456 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 FAM169AQ9Y6X4 670 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 C2orf74A8MZ97 194 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 POLR2DO15514 142 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 STRNO43815 780 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 RGS20O76081 388 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PGM3O95394 542 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 MOCS3O95396 460 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 APOA1P02647 267 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CNTFP26441 200 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ARF5P84085 180 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 KRT32Q14532 448 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TMEM67Q5HYA8 995 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 C6orf118Q5T5N4 469 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ZNF425Q6IV72 752 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 BLOC1S2Q6QNY1 142 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PIK3AP1Q6ZUJ8 805 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PHC2Q8IXK0 858 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 DNAAF3Q8N9W5 541 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TTC13Q8NBP0 860 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TTLL11Q8NHH1 800 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 HDAC7Q8WUI4 952 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 DDX17Q92841 729 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 NMD3Q96D46 503 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 RBM41Q96IZ5 413 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 FERMT1Q9BQL6 677 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TYW1Q9NV66 732 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 DDX19BQ9UMR2 479 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 DUSP12Q9UNI6 340 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ATP5F1P24539 256 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CARSP49589 748 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CKAP4Q07065 602 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 STRN3Q13033 797 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CAPRIN1Q14444 709 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 COG2Q14746 738 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 PYHIN1Q6K0P9 492 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 HMBOX1Q6NT76 420 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 UNC5DQ6UXZ4 953 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 CCDC149Q6ZUS6 474 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SUCLG2Q96I99 432 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 C8orf76Q96K31 380 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TMEM87BQ96K49 555 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 BEGAINQ9BUH8 593 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 NT5C3AQ9H0P0 336 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 NAPBQ9H115 298 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SEC63Q9UGP8 760 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 ZNF225Q9UK10 706 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SNX13Q9Y5W8 968 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 SOS1Q07889 1333 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 TNIKQ9UKE5 1360 aa5.61□□□□□ -1.51
R3HDM1-204ENST00000410054 VSTM5A8MXK1 200 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms