RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 XRCC5P13010 732 aaKnown RBP22.11■■□□□ 1.13
USP39-204ENST00000409766 CASP4P49662 377 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 CHMP4BP1P59074 171 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 APBA1Q02410 837 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 FAM178BQ8IXR5 827 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 REPS2Q8NFH8 660 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 IFIH1Q9BYX4 1025 aaKnown RBP22.11■■□□□ 1.13
USP39-204ENST00000409766 GANQ9H2C0 597 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 AKR1B10O60218 316 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 EPB41P11171 864 aaKnown RBP22.11■■□□□ 1.13
USP39-204ENST00000409766 CLCN6P51797 869 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 HMGCS2P54868 508 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 MAPK7Q13164 816 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 WHAMMP3Q1A5X7 153 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 ODR4Q5SWX8 454 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 TEX35Q5T0J7 233 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 SFMBT2Q5VUG0 894 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 DPY19L2P1Q6NXN4 242 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 DAW1Q8N136 415 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 KLRG1Q96E93 195 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 IKZF4Q9H2S9 585 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 DDX41Q9UJV9 622 aaKnown RBP22.11■■□□□ 1.13
USP39-204ENST00000409766 MYO6Q9UM54 1294 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 ADAMTS5Q9UNA0 930 aa22.11■■□□□ 1.13
USP39-204ENST00000409766 PADI6Q6TGC4 694 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 NSMFQ6X4W1 530 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 BORCS6Q96GS4 357 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 EPC1Q9H2F5 836 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 RNF146Q9NTX7 359 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 ZNF446Q9NWS9 450 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 GGA3Q9NZ52 723 aa22.1■■□□□ 1.13
USP39-204ENST00000409766 PUF60Q9UHX1 559 aaKnown RBP22.1■■□□□ 1.13
USP39-204ENST00000409766 DBR1Q9UK59 544 aaKnown RBP22.1■■□□□ 1.13
USP39-204ENST00000409766 C19orf81C9J6K1 198 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 HIP1RO75146 1068 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 TFRCP02786 760 aaKnown RBP22.09■■□□□ 1.13
USP39-204ENST00000409766 MYCLP12524 364 aaPredicted RBP22.09■■□□□ 1.13
USP39-204ENST00000409766 QARSP47897 775 aaKnown RBP22.09■■□□□ 1.13
USP39-204ENST00000409766 STXBP4Q6ZWJ1 553 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 TRAPPC11Q7Z392 1133 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 GPIHBP1Q8IV16 184 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 SLC35C1Q96A29 364 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 STRA6Q9BX79 667 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 PLCB1Q9NQ66 1216 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 SAMM50Q9Y512 469 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 LYPLA2O95372 231 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 SERPING1P05155 500 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 DSG3P32926 999 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 OAZ1P54368 228 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 SLC9C1Q4G0N8 1177 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 ARHGEF16Q5VV41 709 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 PAPD7Q5XG87 772 aaKnown RBP22.09■■□□□ 1.13
USP39-204ENST00000409766 KSR1Q8IVT5 923 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 DICER1Q9UPY3 1922 aaKnown RBP22.09■■□□□ 1.13
USP39-204ENST00000409766 SSC5DA1L4H1 1573 aa22.09■■□□□ 1.13
USP39-204ENST00000409766 RBAK-RBAKDNI3L0D1 243 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 ENC1O14682 589 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 USO1O60763 962 aaKnown RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 ATP9AO75110 1047 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 PPP1R37O75864 691 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 ZSCAN20P17040 1043 aaPredicted RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 HIRAP54198 1017 aaPredicted RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 BAATQ14032 418 aaPredicted RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 DCAF17Q5H9S7 520 aaPredicted RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 GPC2Q8N158 579 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 AIPL1Q9NZN9 384 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 ZNF214Q9UL59 606 aaPredicted RBP22.08■■□□□ 1.13
USP39-204ENST00000409766 PCDHB13Q9Y5F0 798 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 PPP2R3BQ9Y5P8 575 aa22.08■■□□□ 1.13
USP39-204ENST00000409766 ATP1A1P05023 1023 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 SLC9A1P19634 815 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 RARRES1P49788 294 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 SNRNP48Q6IEG0 339 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 SECISBP2LQ93073 1101 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 ARGLU1Q9NWB6 273 aaPredicted RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 MACROD2A1Z1Q3 448 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 SPDYE4A6NLX3 237 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 PON1P27169 355 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 PSMC2P35998 433 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 GFPT1Q06210 699 aaPredicted RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 COG2Q14746 738 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 EXOC3L4Q17RC7 722 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 TDRD12Q587J7 1177 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 XRRA1Q6P2D8 792 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 MKNK1Q9BUB5 465 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 DMAC2Q9NW81 257 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 HDAC6Q9UBN7 1215 aa22.07■■□□□ 1.12
USP39-204ENST00000409766 POLR2AP24928 1970 aaKnown RBP22.07■■□□□ 1.12
USP39-204ENST00000409766 PJA2O43164 708 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 ACTN1P12814 892 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 TUBB4BP68371 445 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 HS2ST1Q7LGA3 356 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 VSIG10LQ86VR7 867 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 GBP3Q9H0R5 595 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 AGPAT3Q9NRZ7 376 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 OGFRQ9NZT2 677 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 ANO9A1A5B4 782 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 TESPA1A2RU30 521 aaPredicted RBP22.06■■□□□ 1.12
USP39-204ENST00000409766 UCHL3P15374 230 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms